Masahira Hattori

教授(任期付)

  • 45947 Citations
  • 74 h-Index
1984 …2019
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Research Output 1984 2019

2019
21 Citations (Scopus)

A defined commensal consortium elicits CD8 T cells and anti-cancer immunity

Tanoue, T., Morita, S., Plichta, D. R., Skelly, A. N., Suda, W., Sugiura, Y., Narushima, S., Vlamakis, H., Motoo, I., Sugita, K., Shiota, A., Takeshita, K., Yasuma-Mitobe, K., Riethmacher, D., Kaisho, T., Norman, J. M., Mucida, D., Suematsu, M., Yaguchi, T., Bucci, V. & 8 othersInoue, T., Kawakami, Y., Olle, B., Roberts, B., Hattori, M., Xavier, R. J., Atarashi, K. & Honda, K., 2019 Jan 31, In : Nature. 565, 7741, p. 600-605 6 p.

Research output: Contribution to journalArticle

Immunity
T-Lymphocytes
Listeriosis
Histocompatibility
Microbiota

Complete genome sequence of phascolarctobacterium faecium JCM 30894, a succinate-utilizing bacterium isolated from human feces

Ogata, Y., Suda, W., Ikeyama, N., Hattori, M., Ohkuma, M. & Sakamoto, M., 2019 Jan 17, In : Microbiology Resource Announcements. 8, 3, e01487-18.

Research output: Contribution to journalArticle

Succinic Acid
Feces
Genome
Bacteria
Microbiota

Complete Genome Sequence of Plant Growth-Promoting Bacillus pumilus TUAT1

Okazaki, S., Sano, N., Yamada, T., Ishii, K., Kojima, K., Djedidi, S., Artigas Ramírez, M. D., Yuan, K., Kanekatsu, M., Ohkama-Ohtsu, N., Hirose, Y., Oshima, K., Hattori, M. & Yokoyama, T., 2019 Jan 1, In : Microbiology Resource Announcements. 8, 21, e0007619.

Research output: Contribution to journalArticle

Open Access
Plant Genome
Growth
Soil
Genome
Research

Deep sequencing reveals specific bacterial signatures in the subgingival microbiota of healthy subjects

Ikeda, E., Shiba, T., Ikeda, Y., Suda, W., Nakasato, A., Takeuchi, Y., Azuma, M., Hattori, M. & Izumi, Y., 2019 Jan 1, (Accepted/In press) In : Clinical Oral Investigations.

Research output: Contribution to journalArticle

High-Throughput Nucleotide Sequencing
Microbiota
Healthy Volunteers
Tooth
rRNA Genes

Effects of bowel preparation on the human gut microbiome and metabolome

Nagata, N., Tohya, M., Fukuda, S., Suda, W., Nishijima, S., Takeuchi, F., Ohsugi, M., Tsujimoto, T., Nakamura, T., Shimomura, A., Yanagisawa, N., Hisada, Y., Watanabe, K., Imbe, K., Akiyama, J., Mizokami, M., Miyoshi-Akiyama, T., Uemura, N. & Hattori, M., 2019 Dec 1, In : Scientific reports. 9, 1, 4042.

Research output: Contribution to journalArticle

Open Access
Metabolome
Microbiota
Capillary Electrophoresis
Mass Spectrometry
Gastrointestinal Microbiome

Genome analysis of Rubritalea profundi SAORIC-165 T , the first deep-sea verrucomicrobial isolate, from the northwestern Pacific Ocean

Song, J., Kang, I., Joung, Y., Yoshizawa, S., Kaneko, R., Oshima, K., Hattori, M., Hamasaki, K., Kogure, K., Kim, S., Lee, K. & Cho, J. C., 2019 Jan 1, In : Journal of Microbiology.

Research output: Contribution to journalArticle

Pacific Ocean
Oceans and Seas
Genome
Verrucomicrobia
Genes

Genome sequence of “candidatus serratia symbiotica” strain IS, a facultative bacterial symbiont of the pea Aphid acyrthosiphon pisum

Nikoh, N., Koga, R., Oshima, K., Hattori, M. & Fukatsu, T., 2019 May 9, In : Microbiology Resource Announcements. 8, 19, e00272-19.

Research output: Contribution to journalArticle

Open Access
Serratia
Aphids
Peas
Genome
Insects
7 Citations (Scopus)

Gut pathobionts underlie intestinal barrier dysfunction and liver T helper 17 cell immune response in primary sclerosing cholangitis

Nakamoto, N., Sasaki, N., Aoki, R., Miyamoto, K., Suda, W., Teratani, T., Suzuki, T., Koda, Y., Chu, P. S., Taniki, N., Yamaguchi, A., Kanamori, M., Kamada, N., Hattori, M., Ashida, H., Sakamoto, M., Atarashi, K., Narushima, S., Yoshimura, A., Honda, K. & 2 othersSato, T. & Kanai, T., 2019 Jan 1, (Accepted/In press) In : Nature Microbiology.

Research output: Contribution to journalArticle

Th17 Cells
Sclerosing Cholangitis
Liver Diseases
Microbiota
Bacterial Translocation

Influence of Porphyromonas gingivalis in gut microbiota of streptozotocin-induced diabetic mice

Ohtsu, A., Takeuchi, Y., Katagiri, S., Suda, W., Maekawa, S., Shiba, T., Komazaki, R., Udagawa, S., Sasaki, N., Hattori, M. & Izumi, Y., 2019 Jan 1, In : Oral Diseases.

Research output: Contribution to journalArticle

Porphyromonas gingivalis
Streptozocin
Oral Administration
Ileum
Dysbiosis

Insights into the Evolution of Shells and Love Darts of Land Snails Revealed from Their Matrix Proteins

Shimizu, K., Kimura, K., Isowa, Y., Oshima, K., Ishikawa, M., Kagi, H., Kito, K., Hattori, M., Chiba, S. & Endo, K., 2019 Feb 1, In : Genome biology and evolution. 11, 2, p. 380-397 18 p.

Research output: Contribution to journalArticle

Open Access
shell (molluscs)
Love
Snails
snail
snails
2018

Comparison of lipid productivity of Parachlorella kessleri heavy-ion beam irradiation mutant PK4 in laboratory and 150-L mass bioreactor, identification and characterization of its genetic variation

Takeshita, T., Ivanov, I. N., Oshima, K., Ishii, K., Kawamoto, H., Ota, S., Yamazaki, T., Hirata, A., Kazama, Y., Abe, T., Hattori, M., Bišová, K., Zachleder, V. & Kawano, S., 2018 Nov 1, In : Algal Research. 35, p. 416-426 11 p.

Research output: Contribution to journalArticle

bioreactors
irradiation
urea phosphates
ions
mutants
3 Citations (Scopus)

Computer-guided design of optimal microbial consortia for immune system modulation

Stein, R. R., Tanoue, T., Szabady, R. L., Bhattarai, S. K., Olle, B., Norman, J. M., Suda, W., Oshima, K., Hattori, M., Gerber, G. K., Sander, C., Honda, K. & Bucci, V., 2018 Apr 17, In : eLife. 7, e30916.

Research output: Contribution to journalArticle

Microbial Consortia
Clostridium
T-cells
Workflow
Immune system

Draft genome sequence of lactobacillus kosoi nbrc 113063, isolated from kôso, a japanese sugar-vegetable fermented beverage

Chiou, T. Y., Suda, W., Oshima, K., Hattori, M., Matsuzaki, C., Yamamoto, K. & Takahashi, T., 2018 Nov 21, In : Microbiology Resource Announcements. 7, 20, e01173-18.

Research output: Contribution to journalArticle

Beverages
Lactobacillus
Vegetables
Genome
Carbohydrate Metabolism
2 Citations (Scopus)

Dysbiosis of the salivary microbiota in pediatric-onset primary sclerosing cholangitis and its potential as a biomarker

Iwasawa, K., Suda, W., Tsunoda, T., Oikawa-Kawamoto, M., Umetsu, S., Takayasu, L., Inui, A., Fujisawa, T., Morita, H., Sogo, T. & Hattori, M., 2018 Dec 1, In : Scientific Reports. 8, 1, 5480.

Research output: Contribution to journalArticle

Dysbiosis
Sclerosing Cholangitis
Microbiota
Biomarkers
Pediatrics
3 Citations (Scopus)

Ectomycorrhizal fungal communities in alpine relict forests of Pinus pumila on Mt. Norikura, Japan

Koizumi, T., Hattori, M. & Nara, K., 2018 Feb 1, In : Mycorrhiza. 28, 2, p. 129-145 17 p.

Research output: Contribution to journalArticle

Pinus pumila
Pinus
fungal communities
Japan
Seedlings
1 Citation (Scopus)

Effects of attached and suspended biomass on the dynamics of the microbial community and wastewater characteristics in sewers

Shoji, T., Satoh, H., Matsubara, Y., Tamaki, S., Matsuzaka, K., Mino, T., Suda, W. & Hattori, M., 2018 Jan 1, In : Journal of Water and Environment Technology. 16, 6, p. 233-244 12 p.

Research output: Contribution to journalArticle

Sewers
Waste Water
Biomass
microbial community
Wastewater
18 Citations (Scopus)

Efficacy of Indigo Naturalis in a Multicenter Randomized Controlled Trial of Patients With Ulcerative Colitis

INDIGO Study Group, 2018 Mar 1, In : Gastroenterology. 154, 4, p. 935-947 13 p.

Research output: Contribution to journalArticle

Indigo Carmine
Ulcerative Colitis
Randomized Controlled Trials
Placebos
Pulmonary Hypertension
1 Citation (Scopus)

Fecal microbiota transplantation for recurrent Clostridium difficile infection in a patient with ulcerative colitis

Nanki, K., Mizuno, S., Matsuoka, K., Ono, K., Sugimoto, S., Kiyohara, H., Arai, M., Nakashima, M., Takeshita, K., Saigusa, K., Senoh, M., Fukuda, T., Naganuma, M., Kato, H., Suda, W., Hattori, M. & Kanai, T., 2018 Jan 1, In : Intestinal Research. 16, 1, p. 142-146 5 p.

Research output: Contribution to journalArticle

Clostridium Infections
Clostridium difficile
Ulcerative Colitis
Dysbiosis
Recurrence

Gut microbiota-derived D-serine protects against acute kidney injury

Nakade, Y., Iwata, Y., Furuichi, K., Mita, M., Hamase, K., Konno, R., Miyake, T., Sakai, N., Kitajima, S., Toyama, T., Shinozaki, Y., Sagara, A., Miyagawa, T., Hara, A., Shimizu, M., Kamikawa, Y., Sato, K., Oshima, M., Yoneda-Nakagawa, S., Yamamura, Y. & 8 othersKaneko, S., Miyamoto, T., Katane, M., Homma, H., Morita, H., Suda, W., Hattori, M. & Wada, T., 2018 Oct 18, In : JCI insight. 3, 20

Research output: Contribution to journalArticle

Open Access
Acute Kidney Injury
Serine
Kidney
Amino Acids
Dysbiosis
3 Citations (Scopus)

Lactobacillus kosoi sp. nov., a fructophilic species isolated from kôso, a Japanese sugar-vegetable fermented beverage

Chiou, T. Y., Suda, W., Oshima, K., Hattori, M., Matsuzaki, C., Yamamoto, K. & Takahashi, T., 2018 Jul 1, In : Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology. 111, 7, p. 1149-1156 8 p.

Research output: Contribution to journalArticle

Beverages
Lactobacillus
Vegetables
Diaminopimelic Acid
Quinones
2 Citations (Scopus)

Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia

Kumagai, Y., Yoshizawa, S., Nakajima, Y., Watanabe, M., Fukunaga, T., Ogura, Y., Hayashi, T., Oshima, K., Hattori, M., Ikeuchi, M., Kogure, K., DeLong, E. F. & Iwasaki, W., 2018 Feb 6, (Accepted/In press) In : ISME Journal. p. 1-15 15 p.

Research output: Contribution to journalArticle

solar collectors
rhodopsin
bacterium
Bacteria
gene
12 Citations (Scopus)

The effect of fecal microbiota transplantation on psychiatric symptoms among patients with irritable bowel syndrome, functional diarrhea and functional constipation: An open-label observational study

Kurokawa, S., Kishimoto, T., Mizuno, S., Masaoka, T., Naganuma, M., Liang, K. C., Kitazawa, M., Nakashima, M., Shindo, C., Suda, W., Hattori, M., Kanai, T. & Mimura, M., 2018 Aug 1, In : Journal of Affective Disorders. 235, p. 506-512 7 p.

Research output: Contribution to journalArticle

Irritable Bowel Syndrome
Constipation
Observational Studies
Psychiatry
Diarrhea
4 Citations (Scopus)

β-Glucans in food modify colonic microflora by inducing antimicrobial protein, calprotectin, in a Dectin-1-induced-IL-17F-dependent manner

Kamiya, T., Tang, C., Kadoki, M., Oshima, K., Hattori, M., Saijo, S., Adachi, Y., Ohno, N. & Iwakura, Y., 2018 May 1, In : Mucosal Immunology. 11, 3, p. 763-773 11 p.

Research output: Contribution to journalArticle

Leukocyte L1 Antigen Complex
Glucans
Interleukin-17
Food
Dextran Sulfate
2017

A 3-dimensional mathematical model of microbial proliferation that generates the characteristic cumulative relative abundance distributions in gut microbiomes

Takayasu, L., Suda, W., Watanabe, E., Fukuda, S., Takanashi, K., Ohno, H., Takayasu, M., Takayasu, H. & Hattori, M., 2017 Aug 1, In : PLoS One. 12, 8, e0180863.

Research output: Contribution to journalArticle

Physiology
Spatial distribution
Theoretical Models
mathematical models
digestive system
10 Citations (Scopus)

Aging-related changes in the diversity of women's skin microbiomes associated with oral bacteria

Shibagaki, N., Suda, W., Clavaud, C., Bastien, P., Takayasu, L., Iioka, E., Kurokawa, R., Yamashita, N., Hattori, Y., Shindo, C., Breton, L. & Hattori, M., 2017 Dec 1, In : Scientific Reports. 7, 1, 10567.

Research output: Contribution to journalArticle

Microbiota
Bacteria
Skin
Skin Aging
Forehead
3 Citations (Scopus)

A novel transmembrane protein defines the endoplasmic reticulum stress-induced cell death pathway

Tamaki, T., Kamatsuka, K., Sato, T., Morooka, S., Otsuka, K., Hattori, M. & Sugiyama, T., 2017 Apr 22, In : Biochemical and Biophysical Research Communications. 486, 1, p. 149-155 7 p.

Research output: Contribution to journalArticle

Endoplasmic Reticulum Stress
Cell death
Cell Death
Small Interfering RNA
Proteins
21 Citations (Scopus)

A proliferative probiotic Bifidobacterium strain in the gut ameliorates progression of metabolic disorders via microbiota modulation and acetate elevation

Aoki, R., Kamikado, K., Suda, W., Takii, H., Mikami, Y., Suganuma, N., Hattori, M. & Koga, Y., 2017 Mar 2, In : Scientific Reports. 7, 43522.

Research output: Contribution to journalArticle

Bifidobacterium
Microbiota
Probiotics
Acetates
Sulfalene
21 Citations (Scopus)

Bifidobacterium -Rich Fecal Donor May Be a Positive Predictor for Successful Fecal Microbiota Transplantation in Patients with Irritable Bowel Syndrome

Mizuno, S., Masaoka, T., Naganuma, M., Kishimoto, T., Kitazawa, M., Kurokawa, S., Nakashima, M., Takeshita, K., Suda, W., Mimura, M., Hattori, M. & Kanai, T., 2017 Aug 1, In : Digestion. 96, 1, p. 29-38 10 p.

Research output: Contribution to journalArticle

Bifidobacterium
Irritable Bowel Syndrome
Tissue Donors
Dysbiosis
Psychology
3 Citations (Scopus)

Changes in the bacterial community in the fermentation process of kôso, a Japanese sugar-vegetable fermented beverage

Chiou, T. Y., Suda, W., Oshima, K., Hattori, M. & Takahashi, T., 2017, In : Bioscience, Biotechnology and Biochemistry. 81, 2, p. 403-410 8 p.

Research output: Contribution to journalArticle

Beverages
Vegetables
Sugars
Fermentation
Lactococcus
11 Citations (Scopus)

Characterisation of the faecal microbiota in Japanese patients with paediatric-onset primary sclerosing cholangitis

Iwasawa, K., Suda, W., Tsunoda, T., Oikawa-Kawamoto, M., Umetsu, S., Inui, A., Fujisawa, T., Morita, H., Sogo, T. & Hattori, M., 2017 Jul 1, In : Gut. 66, 7, p. 1344-1346 3 p.

Research output: Contribution to journalLetter

5 Citations (Scopus)

Circadian oscillations of microbial and functional composition in the human salivary microbiome

Takayasu, L., Suda, W., Takanashi, K., Iioka, E., Kurokawa, R., Shindo, C., Hattori, Y., Yamashita, N., Nishijima, S., Oshima, K. & Hattori, M., 2017 Jun 1, In : DNA Research. 24, 3, p. 261-270 10 p.

Research output: Contribution to journalArticle

Microbiota
Gemella
Microbial Genes
Prevotella
Bacteroidetes
9 Citations (Scopus)

Clinical impact of pre-transplant gut microbial diversity on outcomes of allogeneic hematopoietic stem cell transplantation

Doki, N., Suyama, M., Sasajima, S., Ota, J., Igarashi, A., Mimura, I., Morita, H., Fujioka, Y., Sugiyama, D., Nishikawa, H., Shimazu, Y., Suda, W., Takeshita, K., Atarashi, K., Hattori, M., Sato, E., Watakabe-Inamoto, K., Yoshioka, K., Najima, Y., Kobayashi, T. & 5 othersKakihana, K., Takahashi, N., Sakamaki, H., Honda, K. & Ohashi, K., 2017 Sep 1, In : Annals of Hematology. 96, 9, p. 1517-1523 7 p.

Research output: Contribution to journalArticle

Hematopoietic Stem Cell Transplantation
Graft vs Host Disease
Transplants
Bacteroidetes
Microbiota
9 Citations (Scopus)

Commensal Lactobacillus Controls Immune Tolerance during Acute Liver Injury in Mice

Nakamoto, N., Amiya, T., Aoki, R., Taniki, N., Koda, Y., Miyamoto, K., Teratani, T., Suzuki, T., Chiba, S., Chu, P. S., Hayashi, A., Yamaguchi, A., Shiba, S., Miyake, R., Katayama, T., Suda, W., Mikami, Y., Kamada, N., Ebinuma, H., Saito, H. & 2 othersHattori, M. & Kanai, T., 2017 Oct 31, In : Cell Reports. 21, 5, p. 1215-1226 12 p.

Research output: Contribution to journalArticle

Immune Tolerance
Lactobacillus
Liver
Wounds and Injuries
Dendritic Cells
4 Citations (Scopus)

Comprehensive single-cell transcriptome analysis reveals heterogeneity in endometrioid adenocarcinoma tissues

Hashimoto, S., Tabuchi, Y., Yurino, H., Hirohashi, Y., Deshimaru, S., Asano, T., Mariya, T., Oshima, K., Takamura, Y., Ukita, Y., Ametani, A., Kondo, N., Monma, N., Takeda, T., Misu, S., Okayama, T., Ikeo, K., Saito, T., Kaneko, S., Suzuki, Y. & 3 othersHattori, M., Matsushima, K. & Torigoe, T., 2017 Dec 1, In : Scientific Reports. 7, 1, 14225.

Research output: Contribution to journalArticle

Single-Cell Analysis
Endometrioid Carcinoma
Gene Expression Profiling
Epithelial-Mesenchymal Transition
Neoplasms
5 Citations (Scopus)

Confounding effects of microbiome on the susceptibility of TNFSF15 to Crohn’s disease in the Ryukyu Islands

Nakagome, S., Chinen, H., Iraha, A., Hokama, A., Takeyama, Y., Sakisaka, S., Matsui, T., Kidd, J. R., Kidd, K. K., Said, H. S., Suda, W., Morita, H., Hattori, M., Hanihara, T., Kimura, R., Ishida, H., Fujita, J., Kinjo, F., Mano, S. & Oota, H., 2017 Apr 1, In : Human Genetics. 136, 4, p. 387-397 11 p.

Research output: Contribution to journalArticle

Microbiota
Islands
Crohn Disease
Tumor Necrosis Factor-alpha
Prevotella

Correction: Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053)

Tanaka, M., Endo, S., Kotake, F., Al-Saari, N., Amin, A. K. M. R., Feng, G., Mino, S., Doi, H., Ogura, Y., Hayashi, T., Suda, W., Hattori, M., Yumoto, I., Sawabe, T., Sawabe, T. & Araki, T., 2017 Dec 1, In : PLoS One. 12, 12, e0189555.

Research output: Contribution to journalComment/debate

Seaweed
Vibrio
Glucosamine
lysine decarboxylase
macroalgae

Corrigendum to “Vibrio ishigakensis sp. nov., in Halioticoli clade isolated from seawater in Okinawa coral reef area, Japan” [Syst. Appl. Microbiol. 39 (5) (2016) 330–335](S0723202016300030)(10.1016/j.syapm.2016.04.002)

Gao, F., Al-saari, N., Rohul Amin, A. K. M., Sato, K., Mino, S., Suda, W., Oshima, K., Hattori, M., Ohkuma, M., Hargreaves, P. I., Meirelles, P. M., Thompson, F. L., Thompson, C., Gomez-Gil, B., Sawabe, T. & Sawabe, T., 2017 Dec 1, In : Systematic and Applied Microbiology. 40, 8, 1 p.

Research output: Contribution to journalComment/debate

Coral Reefs
Vibrio
Ryukyu Archipelago
Seawater
coral reefs
6 Citations (Scopus)

DNA hypermethyation and silencing of PITX1 correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma

Otsubo, T., Yamada, K., Hagiwara, T., Oshima, K., Iida, K., Nishikata, K., Toyoda, T., Igari, T., Nohara, K., Yamashita, S., Hattori, M., Dohi, T. & Kawamura, Y. I., 2017, In : Oncotarget. 8, 48, p. 84434-84448 15 p.

Research output: Contribution to journalArticle

DNA
DNA Methylation
Neoplasms
Tumor Suppressor Genes
Immunoprecipitation
7 Citations (Scopus)

Draft genome sequencing of the highly halotolerant and allopolyploid yeast Zygosaccharomyces rouxii NBRC 1876

Sato, A., Matsushima, K., Oshima, K., Hattori, M. & Koyama, Y., 2017, In : Genome Announcements. 5, 7, e01610-16.

Research output: Contribution to journalArticle

Zygosaccharomyces
Soy Foods
Yeasts
Genome
Ointments
17 Citations (Scopus)

Dysbiosis and compositional alterations with aging in the gut microbiota of patients with heart failure

Kamo, T., Akazawa, H., Suda, W., Saga-Kamo, A., Shimizu, Y., Yagi, H., Liu, Q., Nomura, S., Naito, A. T., Takeda, N., Harada, M., Toko, H., Kumagai, H., Ikeda, Y., Takimoto, E., Suzuki, J. I., Honda, K., Morita, H., Hattori, M. & Komuro, I., 2017 Mar 1, In : PLoS One. 12, 3, e0174099.

Research output: Contribution to journalArticle

Dysbiosis
heart failure
intestinal microorganisms
Heart Failure
Aging of materials
75 Citations (Scopus)

Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation

Atarashi, K., Suda, W., Luo, C., Kawaguchi, T., Motoo, I., Narushima, S., Kiguchi, Y., Yasuma, K., Watanabe, E., Tanoue, T., Thaiss, C. A., Sato, M., Toyooka, K., Said, H. S., Yamagami, H., Rice, S. A., Gevers, D., Johnson, R. C., Segre, J. A., Chen, K. & 6 othersKolls, J. K., Elinav, E., Morita, H., Xavier, R. J., Hattori, M. & Honda, K., 2017 Oct 20, In : Science. 358, 6361, p. 359-365 7 p.

Research output: Contribution to journalArticle

Th1 Cells
Klebsiella
Intestines
Germ-Free Life
Inflammation
59 Citations (Scopus)

Enterotypes in the landscape of gut microbial community composition

Costea, P. I., Hildebrand, F., Manimozhiyan, A., Bäckhed, F., Blaser, M. J., Bushman, F. D., De Vos, W. M., Ehrlich, S. D., Fraser, C. M., Hattori, M., Huttenhower, C., Jeffery, I. B., Knights, D., Lewis, J. D., Ley, R. E., Ochman, H., O'Toole, P. W., Quince, C., Relman, D. A., Shanahan, F. & 9 othersSunagawa, S., Wang, J., Weinstock, G. M., Wu, G. D., Zeller, G., Zhao, L., Raes, J., Knight, R. & Bork, P., 2017 Jan 1, In : Nature Microbiology. 3, 1, p. 8-16 9 p.

Research output: Contribution to journalArticle

Microbiota
Health
Population
Gastrointestinal Microbiome
8 Citations (Scopus)

Gallbladder-derived surfactant protein D regulates gut commensal bacteria for maintaining intestinal homeostasis

Sarashina-Kida, H., Negishi, H., Nishio, J., Suda, W., Nakajima, Y., Yasui-Kato, M., Iwaisako, K., Kang, S., Endo, N., Yanai, H., Asagiri, M., Kida, H., Hattori, M., Kumanogoh, A. & Taniguchi, T., 2017 Sep 19, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 38, p. 10178-10183 6 p.

Research output: Contribution to journalArticle

Pulmonary Surfactant-Associated Protein D
Microbiota
Colitis
Gallbladder
Homeostasis
4 Citations (Scopus)

Genomic structure and evolution of the mating type locus in the green seaweed Ulva partita

Yamazaki, T., Ichihara, K., Suzuki, R., Oshima, K., Miyamura, S., Kuwano, K., Toyoda, A., Suzuki, Y., Sugano, S., Hattori, M. & Kawano, S., 2017 Dec 1, In : Scientific Reports. 7, 1, 11679.

Research output: Contribution to journalArticle

Ulva
macroalgae
genomics
loci
haploidy
8 Citations (Scopus)

Intestinal Dysbiosis and Biotin Deprivation Induce Alopecia through Overgrowth of Lactobacillus murinus in Mice

Hayashi, A., Mikami, Y., Miyamoto, K., Kamada, N., Sato, T., Mizuno, S., Naganuma, M., Teratani, T., Aoki, R., Fukuda, S., Suda, W., Hattori, M., Amagai, M., Ohyama, M. & Kanai, T., 2017 Aug 15, In : Cell Reports. 20, 7, p. 1513-1524 12 p.

Research output: Contribution to journalArticle

Dysbiosis
Alopecia
Lactobacillus
Biotin
Physiology
12 Citations (Scopus)

Microbiome profile of the amniotic fluid as a predictive biomarker of perinatal outcome

Urushiyama, D., Suda, W., Ohnishi, E., Araki, R., Kiyoshima, C., Kurakazu, M., Sanui, A., Yotsumoto, F., Murata, M., Nabeshima, K., Yasunaga, S., Saito, S., Nomiyama, M., Hattori, M., Miyamoto, S. & Hata, K., 2017 Dec 1, In : Scientific Reports. 7, 1, 12171.

Research output: Contribution to journalArticle

Chorioamnionitis
Microbiota
Amniotic Fluid
Biomarkers
Ribosomal DNA
1 Citation (Scopus)

Root-associated fungal communities in three Pyroleae species and their mycobiont sharing with surrounding trees in subalpine coniferous forests on Mount Fuji, Japan

Jia, S., Nakano, T., Hattori, M. & Nara, K., 2017 Nov 1, In : Mycorrhiza. 27, 8, p. 733-745 13 p.

Research output: Contribution to journalArticle

subalpine forests
fungal communities
coniferous forest
Pyrola
coniferous forests
12 Citations (Scopus)

Single fecal microbiota transplantation failed to change intestinal microbiota and had limited effectiveness against ulcerative colitis in Japanese patients

Mizuno, S., Nanki, K., Matsuoka, K., Saigusa, K., Ono, K., Arai, M., Sugimoto, S., Kiyohara, H., Nakashima, M., Takeshita, K., Naganuma, M., Suda, W., Hattori, M. & Kanai, T., 2017, In : Intestinal Research. 15, 1, p. 68-74 7 p.

Research output: Contribution to journalArticle

Ulcerative Colitis
Information Services
Tissue Donors
Dysbiosis
Clinical Trials
17 Citations (Scopus)

Small genome symbiont underlies cuticle hardness in beetles

Anbutsu, H., Moriyama, M., Nikoh, N., Hosokawa, T., Futahashi, R., Tanahashi, M., Meng, X. Y., Kuriwada, T., Mori, N., Oshima, K., Hattori, M., Fujie, M., Satoh, N., Maeda, T., Shigenobu, S., Koga, R. & Fukatsu, T., 2017 Oct 3, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 40, p. E8382-E8391

Research output: Contribution to journalArticle

Beetles
Hardness
Tyrosine
Weevils
Genome
73 Citations (Scopus)

Towards standards for human fecal sample processing in metagenomic studies

Costea, P. I., Zeller, G., Sunagawa, S., Pelletier, E., Alberti, A., Levenez, F., Tramontano, M., Driessen, M., Hercog, R., Jung, F. E., Kultima, J. R., Hayward, M. R., Coelho, L. P., Allen-Vercoe, E., Bertrand, L., Blaut, M., Brown, J. R. M., Carton, T., Cools-Portier, S., Daigneault, M. & 38 othersDerrien, M., Druesne, A., De Vos, W. M., Finlay, B. B., Flint, H. J., Guarner, F., Hattori, M., Heilig, H., Luna, R. A., Van Hylckama Vlieg, J., Junick, J., Klymiuk, I., Langella, P., Le Chatelier, E., Mai, V., Manichanh, C., Martin, J. C., Mery, C., Morita, H., O'toole, P. W., Orvain, C., Patil, K. R., Penders, J., Persson, S., Pons, N., Popova, M., Salonen, A., Saulnier, D., Scott, K. P., Singh, B., Slezak, K., Veiga, P., Versalovic, J., Zhao, L., Zoetendal, E. G., Ehrlich, S. D., Dore, J. & Bork, P., 2017 Nov 1, In : Nature Biotechnology. 35, 11, p. 1069-1076 8 p.

Research output: Contribution to journalArticle

Metagenomics
DNA
Processing
Microbiota
Gram-Negative Bacteria