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Fingerprint Fingerprint is based on mining the text of the person's scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 2 Similar Profiles
RNA Engineering & Materials Science
Long Noncoding RNA Medicine & Life Sciences
Untranslated RNA Medicine & Life Sciences
Computational Biology Medicine & Life Sciences
Base Pairing Medicine & Life Sciences
Sequence Alignment Medicine & Life Sciences
Genome Medicine & Life Sciences
Bioinformatics Chemical Compounds

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Research Output 2003 2018

  • 961 Citations
  • 14 h-Index
  • 50 Article
  • 2 Chapter
  • 2 Conference contribution
  • 1 Comment/debate

A Novel Method for Assessing the Statistical Significance of RNA-RNA Interactions Between Two Long RNAs

Fukunaga, T. & Hamada, M., 2018 Sep 1, In : Journal of Computational Biology. 25, 9, p. 976-986 11 p.

Research output: Contribution to journalArticle

Statistical Significance
RNA
Interaction
5' Untranslated Regions
3' Untranslated Regions

Beyond similarity assessment: Selecting the optimal model for sequence alignment via the Factorized Asymptotic Bayesian algorithm

Takeda, T. & Hamada, M., 2018 Feb 15, In : Bioinformatics. 34, 4, p. 576-584 9 p.

Research output: Contribution to journalArticle

Sequence Alignment
Markov Model
Hidden Markov models
Statistical Models
Computational Biology
1 Citation (Scopus)

DeepM6ASeq: Prediction and characterization of m6A-containing sequences using deep learning

Zhang, Y. & Hamada, M., 2018 Dec 31, In : BMC Bioinformatics. 19, 524.

Research output: Contribution to journalArticle

Methylation
Learning
RNA
Predict
Prediction

Estimating energy parameters for RNA secondary structure predictions using both experimental and computational data

Nishida, S., Sakuraba, S., Asai, K. & Hamada, M., 2018 Mar 9, (Accepted/In press) In : IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Research output: Contribution to journalArticle

RNA Secondary Structure
Structure Prediction
RNA
Free energy
Energy
4 Citations (Scopus)

Identification and analysis of ribosome-associated lncRNAs using ribosome profiling data

Zeng, C., Fukunaga, T. & Hamada, M., 2018 May 29, In : BMC Genomics. 19, 1, 414.

Research output: Contribution to journalArticle

Long Noncoding RNA
Ribosomes