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• DNA micropatterning on polycrystalline diamond via one-step direct amination

  Zhang, G. J., Song, K. S., Nakamura, Y., Ueno, T., Funatsu, T., Ohdomari, I. & Kawarada, H., 2006 Apr 11, In: Langmuir. 22, 8, p. 3728-3734 7 p.

  Research output: Contribution to journal › Article › peer-review
  112 Citations (Scopus)

• DNA microarray mediated transcriptional profiling of Nitrosomonas europaea in response to linear alkylbenzene sulfonates

  Urakawa, H., Matsumoto, J., Inaba, K. & Tsuneda, S., 2008 May, In: FEMS Microbiology Letters. 282, 2, p. 166-173 8 p.

  Research output: Contribution to journal › Article › peer-review
  12 Citations (Scopus)

• DNA microarray analysis of redox-responsive genes in the genome of the cyanobacterium Synechocystis sp. strain PCC 6803

  Hihara, Y., Sonoike, K., Kanehisa, M. & Ikeuchi, M., 2003 Mar, In: Journal of Bacteriology. 185, 5, p. 1719-1725 7 p.

  Research output: Contribution to journal › Article › peer-review
  133 Citations (Scopus)

• DNA methylation variation in cloned mice

  Ohgane, J., Wakayama, T., Kogo, Y., Senda, S., Hattori, N., Tanaka, S., Yanagimachi, R. & Shiota, K., 2001, In: Genesis. 30, 2, p. 45-50 6 p.

  Research output: Contribution to journal › Article › peer-review
  179 Citations (Scopus)

• DNA methylation status of nuclear-encoded mitochondrial genes underlies the tissue-dependent mitochondrial functions

  Takasugi, M., Yagi, S., Hirabayashi, K. & Shiota, K., 2010 Aug 19, In: BMC Genomics. 11, 1, 481.

  Research output: Contribution to journal › Article › peer-review
  38 Citations (Scopus)

• DNA methylation regulates placental lactogen I gene expression

  Cho, J. H., Kimura, H., Minami, T., Ohgane, J., Hattori, N., Tanaka, S. & Shiota, K., 2001, In: Endocrinology. 142, 8, p. 3389-3396 8 p.

  Research output: Contribution to journal › Article › peer-review
  54 Citations (Scopus)

• DNA methylation profiles provide a viable index for porcine pluripotent stem cells

  Arai, Y., Ohgane, J., Fujishiro, S. H., Nakano, K., Matsunari, H., Watanabe, M., Umeyama, K., Azuma, D., Uchida, N., Sakamoto, N., Makino, T., Yagi, S., Shiota, K., Hanazono, Y. & Nagashima, H., 2013 Nov, In: Genesis. 51, 11, p. 763-776 14 p.

  Research output: Contribution to journal › Article › peer-review
  5 Citations (Scopus)

• DNA methylation profiles of donor nuclei cells and tissues of cloned bovine fetuses.

  Kremenskoy, M., Kremenska, Y., Suzuki, M., Imai, K., Takahashi, S., Hashizume, K., Yagi, S. & Shiota, K., 2006 Apr, In: Journal of Reproduction and Development. 52, 2, p. 259-266 8 p.

  Research output: Contribution to journal › Article › peer-review
  37 Citations (Scopus)

• DNA methylation profiles of CpG islands for cellular differentiation and development in mammals

  Shiota, K., 2004, In: Cytogenetic and Genome Research. 105, 2-4, p. 325-334 10 p.

  Research output: Contribution to journal › Article › peer-review
  131 Citations (Scopus)

• DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression

  Yagi, S., Hirabayashi, K., Sato, S., Li, W., Takahashi, Y., Hirakawa, T., Wu, G., Hattori, N., Hattori, N., Ohgane, J., Tanaka, S., Liu, X. S. & Shiota, K., 2008 Dec, In: Genome Research. 18, 12, p. 1969-1978 10 p.

  Research output: Contribution to journal › Article › peer-review
  132 Citations (Scopus)

• DNA methylation profile of Aire-deficient mouse medullary thymic epithelial cells

  Wu, G., Hirabayashi, K., Sato, S., Akiyama, N., Akiyama, T., Shiota, K. & Yagi, S., 2012 Nov 2, In: BMC Immunology. 13, 58.

  Research output: Contribution to journal › Article › peer-review
  8 Citations (Scopus)

• DNA methylation profile dynamics of tissue-dependent and differentially methylated regions during mouse brain development

  Hirabayashi, K., Shiota, K. & Yagi, S., 2013 Feb 6, In: BMC Genomics. 14, 1, 82.

  Research output: Contribution to journal › Article › peer-review
  12 Citations (Scopus)

• DNA methylation profile: A composer-, conductor-, and player- orchestrated mammalian genome consisting of genes and transposable genetic elements

  Yagi, S., Hirosawa, M. & Shiota, K., 2012, In: Journal of Reproduction and Development. 58, 3, p. 265-273 9 p.

  Research output: Contribution to journal › Review article › peer-review
  9 Citations (Scopus)

• DNA methylation-mediated control of Sry gene expression in mouse gonadal development

  Nishino, K., Hattori, N., Tanaka, S. & Shiota, K., 2004 May 21, In: Journal of Biological Chemistry. 279, 21, p. 22306-22313 8 p.

  Research output: Contribution to journal › Article › peer-review
  134 Citations (Scopus)

• DNA methylation errors in cloned mice disappear with advancement of aging

  Senda, S., Wakayama, T., Arai, Y., Yamazaki, Y., Ohgane, J., Tanaka, S., Hattori, N., Yanagimachi, R. & Shiota, K., 2007 Sep 1, In: Cloning and Stem Cells. 9, 3, p. 293-302 10 p.

  Research output: Contribution to journal › Article › peer-review
  19 Citations (Scopus)

• DNA methylation-dependent modulator of Gsg2/Haspin gene expression

  Sato, S., Maeda, C., Hattori, N., Yagi, S., Tanaka, S. & Shiota, K., 2011, In: Journal of Reproduction and Development. 57, 4, p. 526-533 8 p.

  Research output: Contribution to journal › Article › peer-review
  11 Citations (Scopus)

• DNA methylation-dependent epigenetic regulation of dimethylarginine dimethylaminohydrolase 2 gene in trophoblast cell lineage

  Tomikawa, J., Fukatsu, K., Tanaka, S. & Shiota, K., 2006 Apr 28, In: Journal of Biological Chemistry. 281, 17, p. 12163-12169 7 p.

  Research output: Contribution to journal › Article › peer-review
  47 Citations (Scopus)

• DNA methylation code

  Hattori, N. & Shiota, K., 2002, In: Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 47, 13, p. 1829-1836 8 p.

  Research output: Contribution to journal › Review article › peer-review

• DNA methylation changes during cleft palate formation induced by retinoic acid in mice

  Kuriyama, M., Udagawa, A., Yoshimoto, S., Ichinose, M., Sato, K., Yamazaki, K., Matsuno, Y., Shiota, K. & Mori, C., 2008 Sep, In: Cleft Palate-Craniofacial Journal. 45, 5, p. 545-551 7 p.

  Research output: Contribution to journal › Article › peer-review
  42 Citations (Scopus)

• DNA methylation and its role in the trophoblast cell lineage

  Tanaka, S., Nakanishi, M. O. & Shiota, K., 2014, In: International Journal of Developmental Biology. 58, 2-4, p. 231-238 8 p.

  Research output: Contribution to journal › Article › peer-review
  12 Citations (Scopus)

• DNA-inspired hierarchical polymer design: Electrostatics and hydrogen bonding in concert

  Hemp, S. T. & Long, T. E., 2012 Jan 1, In: Macromolecular Bioscience. 12, 1, p. 29-39 11 p.

  Research output: Contribution to journal › Article › peer-review
  21 Citations (Scopus)

• DNA implementation of simple horn clause computation

  Kobayashi, S., Yokomori, T., Sampei, G. I. & Mizobuchi, K., 1997 Jan 1, p. 213-217. 5 p.

  Research output: Contribution to conference › Paper › peer-review
  10 Citations (Scopus)

• DNA hypomethylation circuit of the mouse oocyte-specific histone H1foo gene in female germ cell lineage

  Maeda, C., Sato, S., Hattori, N., Tanaka, S., Yagi, S. & Shiota, K., 2008 May, In: Biology of Reproduction. 78, 5, p. 816-821 6 p.

  Research output: Contribution to journal › Article › peer-review
  11 Citations (Scopus)

• DNA hypermethyation and silencing of PITX1 correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma

  Otsubo, T., Yamada, K., Hagiwara, T., Oshima, K., Iida, K., Nishikata, K., Toyoda, T., Igari, T., Nohara, K., Yamashita, S., Hattori, M., Dohi, T. & Kawamura, Y. I., 2017, In: Oncotarget. 8, 48, p. 84434-84448 15 p.

  Research output: Contribution to journal › Article › peer-review
  20 Citations (Scopus)

• DNA hybridization efficiency on concave surface nano-structure in hemispherical janus nanocups

  Kim, H., Terazono, H., Takei, H. & Yasuda, K., 2014 Feb 11, In: Langmuir. 30, 5, p. 1272-1280 9 p.

  Research output: Contribution to journal › Article › peer-review
  5 Citations (Scopus)

• DNA extraction using modified bacterial magnetic particles in the presence of amino silane compound

  Yoza, B., Matsumoto, M. & Matsunaga, T., 2002 Apr 11, In: Journal of Biotechnology. 94, 3, p. 217-224 8 p.

  Research output: Contribution to journal › Article › peer-review
  126 Citations (Scopus)

• DNA extraction using bacterial magnetic particles modified with hyperbranched polyamidoamine dendrimer

  Yoza, B., Arakaki, A. & Matsunaga, T., 2003 Mar 20, In: Journal of Biotechnology. 101, 3, p. 219-228 10 p.

  Research output: Contribution to journal › Article › peer-review
  105 Citations (Scopus)

• DNA evolutionary linguistics and RNA structure modeling: A computational approach

  Yokomori, T. & Kobayashi, S., 1995 Jan 1, p. 38-45. 8 p.

  Research output: Contribution to conference › Paper › peer-review
  19 Citations (Scopus)

• DNA endoreplication in the brain neurons during body growth of an adult slug

  Yamagishi, M., Ito, E. & Matsuo, R., 2011 Apr 13, In: Journal of Neuroscience. 31, 15, p. 5596-5604 9 p.

  Research output: Contribution to journal › Article › peer-review
  14 Citations (Scopus)

• DNA-encapsulated chain and wire-like β-MnO2 organosol for oxidative polymerization of pyrrole to polypyrrole

  Ede, S. R. A., Anantharaj, S., Nithiyanantham, U. & Kundu, S., 2015 Feb 21, In: Physical Chemistry Chemical Physics. 17, 7, p. 5474-5484 11 p.

  Research output: Contribution to journal › Article › peer-review
  25 Citations (Scopus)

• DNA databases

  Schuster, A., 2005 Sep, In: BioSystems. 81, 3, p. 234-246 13 p.

  Research output: Contribution to journal › Article › peer-review
  10 Citations (Scopus)

• DNA damage sensible engineered promoter for cellular biosensing of cytotoxicity

  Wada, K. I., Hamaguchi, Y., Furukawa, K. & Taniguchi, A., 2009 Apr 1, In: Biotechnology and bioengineering. 102, 5, p. 1460-1465 6 p.

  Research output: Contribution to journal › Article › peer-review
  8 Citations (Scopus)

• DNA conformation of the region preceding the beta-lactamase promoter of pUC19 which is required for efficient transcription.

  Hirota, Y. & Ohyama, T., 1992, In: Nucleic acids symposium series. 27, p. 151-152 2 p.

  Research output: Contribution to journal › Article › peer-review
  1 Citation (Scopus)

• DNA computing approach to optimal decision problems

  Watada, J., Kojima, S., Ueda, S. & Ono, O., 2004, IEEE International Conference on Fuzzy Systems. Vol. 3. p. 1579-1584 6 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
  9 Citations (Scopus)

• DNA computing approach to management engineering

  Jeng, D. J. F., Bakar, R. A. & Watada, J., 2007, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 3 ed. Vol. 4694 LNAI. p. 370-377 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4694 LNAI, no. PART 3).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
  2 Citations (Scopus)

• DNA computing and its applications

  Watada, J. & Bakar, R. B. A., 2008, Proceedings - 8th International Conference on Intelligent Systems Design and Applications, ISDA 2008. Vol. 2. p. 288-294 7 p. 4696346

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
  41 Citations (Scopus)

• DNA computing and its application

  Watada, J., 2008, Studies in Computational Intelligence. Vol. 115. p. 1065-1089 25 p. (Studies in Computational Intelligence; vol. 115).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter
  23 Citations (Scopus)

• DNA Computing: 12th International Meeting on DNA Computing, DNA12, Seoul, Korea, June 5-9, 2006, Revised Selected Papers - Preface

  Mao, C. & Yokomori, T., 2006 Dec 1, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4287 LNCS

  Research output: Contribution to journal › Editorial › peer-review

• DNA binding properties of the actin-related protein Arp8 and its role in DNA repair

  Osakabe, A., Takahashi, Y., Murakami, H., Otawa, K., Tachiwana, H., Oma, Y., Nishijima, H., Shibahara, K. I., Kurumizaka, H. & Harata, M., 2014 Oct 9, In: PLoS One. 9, 10, e108354.

  Research output: Contribution to journal › Article › peer-review
  13 Citations (Scopus)

• DNA-binding properties of heavy-metal complexes and consequences of structural changes

  Ito, T., Yamaguchi, T. & Kubiak, C. P., 2000, In: Macromolecular Symposia. 156, p. 277-284 8 p.

  Research output: Contribution to journal › Article › peer-review
  2 Citations (Scopus)

• DNA-based evolutionary algorithm for cable trench problem

  Jeng, D. J. F., Kim, I. & Watada, J., 2006, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 4253 LNAI - III. p. 922-929 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4253 LNAI - III).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
  6 Citations (Scopus)

• DNA as Functional Materials

  Umeno, D. & Maeda, M., 1997, In: Kobunshi. 46, 5, p. 314-318 5 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Citation (Scopus)

• DNA approach to solve clustering problem based on a mutual order

  Bakar, R. B. A., Watada, J. & Pedrycz, W., 2008 Jan, In: BioSystems. 91, 1, p. 1-12 12 p.

  Research output: Contribution to journal › Article › peer-review
  53 Citations (Scopus)

• DNA algorithms for rough set analysis

  Schuster, A., 2004 Dec 1, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2690, p. 498-513 16 p.

  Research output: Contribution to journal › Article › peer-review
  3 Citations (Scopus)

• DNA algorithms for Petri net modeling

  Schuster, A., 2008 Dec 15, In: Informatica (Ljubljana). 32, 4, p. 421-427 7 p.

  Research output: Contribution to journal › Article › peer-review

• DM-LIMGA: Dual Migration Localized Island Model Genetic Algorithm—a better diversity preserver island model

  Gozali, A. A. & Fujimura, S., 2019 Jan 1, In: Evolutionary Intelligence.

  Research output: Contribution to journal › Article › peer-review
  6 Citations (Scopus)

• DMAP-accelerated rhodium(I) chloride catalyzed hydroboration of vinylarenes

  Endo, K., Hirokami, M., Takeuchi, K. & Shibata, T., 2008 Dec 16, In: Synlett. 20, p. 3231-3233 3 p.

  Research output: Contribution to journal › Article › peer-review
  15 Citations (Scopus)

• D-loop of actin differently regulates the motor function of myosins II and V

  Kubota, H., Mikhailenko, S. V., Okabe, H., Taguchi, H. & Ishiwata, S., 2009 Dec 11, In: Journal of Biological Chemistry. 284, 50, p. 35251-35258 8 p.

  Research output: Contribution to journal › Article › peer-review
  10 Citations (Scopus)

• Diz açisinin fonksiyonu olarak i̇nsan grasilis kasi i̇zometrik kuvvetinin i̇ntraoperatif ölçümü

  Translated title of the contribution: Intraoperative measurement of human gracilis muscle isometric forces as a function of knee angleAteş, F., Akgün, U., Karahan, M. & Yücesoy, C. A., 2010, 2010 15th National Biomedical Engineering Meeting, BIYOMUT2010. 5479847

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
  1 Citation (Scopus)

• Division of labour promotes the spread of information in colony emigrations by the ant Temnothorax rugatulus

  Valentini, G., Masuda, N., Shaffer, Z., Hanson, J. R., Sasaki, T., Walker, S. I., Pavlic, T. P. & Pratt, S. C., 2020 Apr 8, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1924, 20192950.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  9 Citations (Scopus)