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• Complete genomic sequence of the equol-producing bacterium Eggerthella sp. Strain YY7918, isolated from adult human intestine

  Yokoyama, S. I., Oshima, K., Nomura, I., Hattori, M. & Suzuki, T., 2011 Oct, In: Journal of Bacteriology. 193, 19, p. 5570-5571 2 p.

  Research output: Contribution to journal › Article › peer-review
  31 Citations (Scopus)

• Complete Genomic DNA Sequence of the East Asian Spotted Fever Disease Agent Rickettsia japonica

  Matsutani, M., Ogawa, M., Takaoka, N., Hanaoka, N., Toh, H., Yamashita, A., Oshima, K., Hirakawa, H., Kuhara, S., Suzuki, H., Hattori, M., Kishimoto, T., Ando, S., Azuma, Y. & Shirai, M., 2013 Sep 9, In: PLoS One. 8, 9, e71861.

  Research output: Contribution to journal › Article › peer-review
  7 Citations (Scopus)

• Complete genome sequences of thermus thermophilus strains HB5002 and HB5008, isolated from mine hot spring in Japan

  Miyazaki, K., Moriya, T., Tokito, N., Oshima, T., Yura, K. & Bessho, Y., 2021 Apr 22, In: Microbiology Resource Announcements. 10, 16, e00272-21.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Citations (Scopus)

• Complete genome sequences of rat and mouse segmented filamentous bacteria, a potent inducer of Th17 cell differentiation

  Prakash, T., Oshima, K., Morita, H., Fukuda, S., Imaoka, A., Kumar, N., Sharma, V. K., Kim, S. W., Takahashi, M., Saitou, N., Taylor, T. D., Ohno, H., Umesaki, Y. & Hattori, M., 2011 Sep 15, In: Cell Host and Microbe. 10, 3, p. 273-284 12 p.

  Research output: Contribution to journal › Article › peer-review
  88 Citations (Scopus)

• Complete genome sequences of Arcobacter butzleri ED-1 and Arcobacter sp. Strain L, both isolated from a microbial fuel cell

  Toh, H., Sharma, V. K., Oshima, K., Kondo, S., Hattori, M., Ward, F. B., Free, A. & Taylor, T. D., 2011 Nov, In: Journal of Bacteriology. 193, 22, p. 6411-6412 2 p.

  Research output: Contribution to journal › Article › peer-review
  44 Citations (Scopus)

• Complete genome sequence of Winogradskyella sp. strain PG-2, a proteorhodopsincontaining marine flavobacterium

  Kumagai, Y., Yoshizawa, S., Oshima, K., Hattori, M., Iwasaki, W. & Kogure, K., 2014, In: Genome Announcements. 2, 3, e00490-14.

  Research output: Contribution to journal › Article › peer-review

• Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2

  Toh, H., Oshima, K., Toyoda, A., Ogura, Y., Ooka, T., Sasamoto, H., Park, S. H., Iyoda, S., Kurokawa, K., Morita, H., Itoh, K., Taylor, T. D., Hayashi, T. & Hattori, M., 2010 Feb, In: Journal of Bacteriology. 192, 4, p. 1165-1166 2 p.

  Research output: Contribution to journal › Article › peer-review
  44 Citations (Scopus)

• Complete genome sequence of the serotype k Streptococcus mutans strain LJ23

  Aikawa, C., Furukawa, N., Watanabe, T., Minegishi, K., Furukawa, A., Eishi, Y., Oshima, K., Kurokawa, K., Hattori, M., Nakano, K., Maruyama, F., Nakagawa, I. & Ooshima, T., 2012 May, In: Journal of Bacteriology. 194, 10, p. 2754-2755 2 p.

  Research output: Contribution to journal › Article › peer-review
  17 Citations (Scopus)

• Complete Genome Sequence of Thermus thermophilus Strain HB5018, Isolated from Mine Hot Spring in Japan

  Miyazaki, K., Moriya, T., Nemoto, N., Oshima, T., Yura, K. & Bessho, Y., 2021 Mar 11, In: Microbiology Resource Announcements. 10, 10, e00039-21.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  3 Citations (Scopus)

• Complete genome sequence of the probiotic Lactobacillus rhamnosus ATCC 53103

  Morita, H., Toh, H., Oshima, K., Murakami, M., Taylor, T. D., Igimi, S. & Hattori, M., 2009 Dec, In: Journal of Bacteriology. 191, 24, p. 7630-7631 2 p.

  Research output: Contribution to journal › Article › peer-review
  65 Citations (Scopus)

• Complete genome sequence of the mitochondrial DNA of the sparkling enope squid, Watasenia scintillans

  Hayashi, K., Kawai, Y. L., Yura, K., Yoshida, M. A., Ogura, A., Hata, K., Nakabayashi, K. & Okamura, K., 2016 May 1, In: Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis. 27, 3, p. 1842-1843 2 p.

  Research output: Contribution to journal › Article › peer-review
  4 Citations (Scopus)

• Complete genome sequence of the mitochondrial DNA of the river lamprey, Lethenteron japonicum

  Kawai, Y. L., Yura, K., Shindo, M., Kusakabe, R., Hayashi, K., Hata, K., Nakabayashi, K. & Okamura, K., 2015 Nov 2, In: Mitochondrial DNA. 26, 6, p. 863-864 2 p.

  Research output: Contribution to journal › Article › peer-review
  2 Citations (Scopus)

• Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1

  Matsunaga, T., Okamura, Y., Fukuda, Y., Wahyudi, A. T., Murase, Y. & Takeyama, H., 2005, In: DNA Research. 12, 3, p. 157-166 10 p.

  Research output: Contribution to journal › Article › peer-review
  177 Citations (Scopus)

• Complete genome sequence of the equol-producing bacterium Adlercreutzia equolifaciens DSM 19450_T

  Toh, H., Oshima, K., Suzuki, T., Hattori, M. & Morita, H., 2013, In: Genome Announcements. 1, 5, e00742-13.

  Research output: Contribution to journal › Article › peer-review
  21 Citations (Scopus)

• Complete Genome Sequence of the Denitrifying and N ₂O-Reducing Bacterium Pseudogulbenkiania sp. Strain NH8B

  Ishii, S., Tago, K., Nishizawa, T., Oshima, K., Hattori, M. & Senoo, K., 2011 Nov, In: Journal of Bacteriology. 193, 22, p. 6395-6396 2 p.

  Research output: Contribution to journal › Article › peer-review
  12 Citations (Scopus)

• Complete genome sequence of the denitrifying and N ₂O-reducing bacterium Azoarcus sp. strain KH32C

  Nishizawa, T., Tago, K., Oshima, K., Hattori, M., Ishii, S., Otsuka, S. & Senoo, K., 2012 Mar, In: Journal of Bacteriology. 194, 5, p. 1255 1 p.

  Research output: Contribution to journal › Article › peer-review
  17 Citations (Scopus)

• Complete genome sequence of the bacterium Porphyromonas gingivalis TDC60, Which causes periodontal disease

  Watanabe, T., Maruyama, F., Nozawa, T., Aoki, A., Okano, S., Shibata, Y., Oshima, K., Kurokawa, K., Hattori, M., Nakagawa, I. & Abiko, Y., 2011 Aug, In: Journal of Bacteriology. 193, 16, p. 4259-4260 2 p.

  Research output: Contribution to journal › Article › peer-review
  44 Citations (Scopus)

• Complete genome sequence of Scardovia inopinata JCM 12537^T, isolated from human dental caries

  Oshima, K., Hayashi, J. I., Toh, H., Nakano, A., Omori, E., Hattori, Y., Morita, H., Honda, K. & Hattori, M., 2015, In: Genome Announcements. 3, 3, e00481-15.

  Research output: Contribution to journal › Article › peer-review
  2 Citations (Scopus)

• Complete genome sequence of Rhodovulum sulfidophilum DSM 2351, an extracellular nucleic acid-producing bacterium

  Nagao, N., Hirose, Y., Misawa, N., Ohtsubo, Y., Umekage, S. & Kikuchi, Y., 2016, In: Genome Announcements. 3, 2, e00388-15.

  Research output: Contribution to journal › Article › peer-review
  11 Citations (Scopus)

• Complete Genome Sequence of Plant Growth-Promoting Bacillus pumilus TUAT1

  Okazaki, S., Sano, N., Yamada, T., Ishii, K., Kojima, K., Djedidi, S., Artigas Ramírez, M. D., Yuan, K., Kanekatsu, M., Ohkama-Ohtsu, N., Hirose, Y., Oshima, K., Hattori, M. & Yokoyama, T., 2019 Jan 1, In: Microbiology Resource Announcements. 8, 21, e0007619.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  6 Citations (Scopus)

• Complete genome sequence of Photobacterium damselae subsp. piscicida strain OT-51443 isolated from yellowtail (Seriola quinqueradiata) in Japan

  Aoki, T., Teru, Y., Morimoto, N., Kono, T., Sakai, M., Takano, T., Hawke, J. P., Fukuda, Y., Takeyama, H. & Hikima, J. I., 2017, In: Genome Announcements. 5, 21, e00404-17.

  Research output: Contribution to journal › Article › peer-review
  8 Citations (Scopus)

• Complete genome sequence of phascolarctobacterium faecium JCM 30894, a succinate-utilizing bacterium isolated from human feces

  Ogata, Y., Suda, W., Ikeyama, N., Hattori, M., Ohkuma, M. & Sakamoto, M., 2019 Jan 17, In: Microbiology Resource Announcements. 8, 3, e01487-18.

  Research output: Contribution to journal › Article › peer-review
  12 Citations (Scopus)

• Complete genome sequence of Parascardovia denticolens JCM 12538^T, isolated from human dental caries

  Oshima, K., Hayashi, J. I., Toh, H., Nakano, A., Shindo, C., Komiya, K., Morita, H., Honda, K. & Hattori, M., 2015, In: Genome Announcements. 3, 3, e00485-15.

  Research output: Contribution to journal › Article › peer-review
  4 Citations (Scopus)

• Complete genome sequence of Leptospirillum ferrooxidans strain C2-3, isolated from a fresh volcanic ash deposit on the Island of Miyake, Japan

  Fujimura, R., Sato, Y., Nishizawa, T., Oshima, K., Kim, S. W., Hattori, M., Kamijo, T. & Ohta, H., 2012 Aug, In: Journal of Bacteriology. 194, 15, p. 4122-4123 2 p.

  Research output: Contribution to journal › Article › peer-review
  30 Citations (Scopus)

• Complete genome sequence of Lactococcus lactis IO-1, a lactic acid bacterium that utilizes xylose and produces high levels of l-lactic acid

  Kato, H., Shiwa, Y., Oshima, K., Machii, M., Araya-Kojima, T., Zendo, T., Shimizu-Kadota, M., Hattori, M., Sonomoto, K. & Yoshikawa, H., 2012 Apr, In: Journal of Bacteriology. 194, 8, p. 2102-2103 2 p.

  Research output: Contribution to journal › Article › peer-review
  40 Citations (Scopus)

• Complete genome sequence of Gardnerella vaginalis strain JCM 11026^T, isolated from vaginal tracts of women

  Oshima, K., Hisamatsu, S., Toh, H., Nakano, A., Kiuchi, M., Kuroyanagi, H., Morita, H. & Hattori, M., 2016, In: Genome Announcements. 3, 2, e00286-15.

  Research output: Contribution to journal › Article › peer-review
  3 Citations (Scopus)

• Complete genome sequence of Finegoldia magna, an anaerobic opportunistic pathogen

  Goto, T., Yamashita, A., Hirakawa, H., Matsutani, M., Todo, K., Ohshima, K., Toh, H., Miyamoto, K., Kuhara, S., Hattori, M., Shimizu, T. & Akimoto, S., 2008, In: DNA Research. 15, 1, p. 39-47 9 p.

  Research output: Contribution to journal › Article › peer-review
  29 Citations (Scopus)

• Complete genome sequence of enterohemorrhagic Eschelichia coli O157: H7 and genomic comparison with a laboratory strain K-12

  Hayashi, T., Makino, K., Ohnishi, M., Kurokawa, K., Ishii, K., Yokoyama, K., Han, C. G., Ohtsubo, E., Nakayama, K., Murata, T., Tanaka, M., Tobe, T., Iida, T., Takami, H., Honda, T., Sasakawa, C., Ogasawara, N., Yasunaga, T., Kuhara, S., Shiba, T. & 2 others, Hattori, M. & Shinagawa, H., 2001, In: DNA Research. 8, 1, p. 11-22 12 p.

  Research output: Contribution to journal › Article › peer-review
  1027 Citations (Scopus)

• Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome

  Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishid, M. & Hattori, M., 2016, In: Genome Announcements. 3, 2, e00385-15.

  Research output: Contribution to journal › Article › peer-review
  14 Citations (Scopus)

• Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation

  Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M. & Hattori, M., 2015, In: Genome Announcements. 3, 3, e00357-15.

  Research output: Contribution to journal › Article › peer-review
  9 Citations (Scopus)

• Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater

  Shimizu, T., Ohtani, K., Hirakawa, H., Ohshima, K., Yamashita, A., Shiba, T., Ogasawara, N., Hattori, M., Kuhara, S. & Hayashi, H., 2002 Jan 22, In: Proceedings of the National Academy of Sciences of the United States of America. 99, 2, p. 996-1001 6 p.

  Research output: Contribution to journal › Article › peer-review
  576 Citations (Scopus)

• Complete genome sequence of Burkholderia sp. strain RPE64, bacterial symbiont of the bean bug Riptortus pedestris

  Shibata, T. F., Maeda, T., Nikoh, N., Yamaguchi, K., Oshima, K., Hattori, M., Nishiyama, T., Hasebe, M., Fukatsu, T., Kikuchi, Y. & Shigenobua, S., 2013, In: Genome Announcements. 1, 4, e00441-13.

  Research output: Contribution to journal › Article › peer-review
  31 Citations (Scopus)

• Complete genome sequence of bradyrhizobium sp. S23321: Insights into symbiosis evolution in soil oligotrophs

  Okubo, T., Tsukui, T., Maita, H., Okamoto, S., Oshima, K., Fujisawa, T., Saito, A., Futamata, H., Hattori, R., Shimomura, Y., Haruta, S., Morimoto, S., Wang, Y., Sakai, Y., Hattori, M., Aizawa, S. I., Nagashima, K. V. P., Masuda, S., Hattori, T., Yamashita, A. & 29 others, Bao, Z., Hayatsu, M., Kajiya-Kanegae, H., Yoshinaga, I., Sakamoto, K., Toyota, K., Nakao, M., Kohara, M., Anda, M., Niwa, R., Jung-Hwan, P., Sameshima-Saito, R., Tokuda, S. I., Yamamoto, S., Yamamoto, S., Yokoyama, T., Akutsu, T., Nakamura, Y., Nakahira-Yanaka, Y., Hoshino, Y. T., Hirakawa, H., Mitsui, H., Terasawa, K., Itakura, M., Sato, S., Ikeda-Ohtsubo, W., Sakakura, N., Kaminuma, E. & Minamisawa, K., 2012, In: Microbes and Environments. 27, 3, p. 306-315 10 p.

  Research output: Contribution to journal › Article › peer-review
  46 Citations (Scopus)

• Complete genome sequence of Bifidobacterium scardovii strain JCM 12489^T, isolated from human blood

  Toh, H., Oshima, K., Nakano, A., Yamashita, N., Iioka, E., Kurokawa, R., Morita, H. & Hattori, M., 2016, In: Genome Announcements. 3, 2, e00285-15.

  Research output: Contribution to journal › Article › peer-review
  5 Citations (Scopus)

• Complete genome sequence of Bifidobacterium pseudocatenulatum JCM 1200^T isolated from infant feces

  Morita, H., Toh, H., Oshima, K., Nakano, A., Arakawa, K., Takayama, Y., Kurokawa, R., Takanashi, K., Honda, K. & Hattori, M., 2015 Sep 1, In: Journal of Biotechnology. 210, p. 68-69 2 p.

  Research output: Contribution to journal › Article › peer-review
  6 Citations (Scopus)

• Complete genome sequence of Bifidobacterium kashiwanohense JCM 15439^T, isolated from feces from a healthy Japanese infant

  Morita, H., Toh, H., Nakano, A., Oshima, K., Takagi, M., Suda, W., Tanabe, S. & Hattori, M., 2016, In: Genome Announcements. 3, 2, e00255-15.

  Research output: Contribution to journal › Article › peer-review
  3 Citations (Scopus)

• Complete genome sequence of Bifidobacterium dentium strain JCM 1195^T, isolated from human dental caries

  Toh, H., Hayashi, J. I., Oshima, K., Nakano, A., Takayama, Y., Takanashi, K., Morita, H. & Hattori, M., 2016, In: Genome Announcements. 3, 2, e00284-15.

  Research output: Contribution to journal › Article › peer-review
  6 Citations (Scopus)

• Complete genome sequence of Bifidobacterium catenulatum JCM 1194^T isolated from human feces

  Morita, H., Toh, H., Oshima, K., Nakano, A., Yamashita, N., Iioka, E., Arakawa, K., Suda, W., Honda, K. & Hattori, M., 2015 Sep 1, In: Journal of Biotechnology. 210, p. 25-26 2 p.

  Research output: Contribution to journal › Article › peer-review
  5 Citations (Scopus)

• Complete genome sequence of Bifidobacterium breve JCM 1192^T isolated from infant feces

  Morita, H., Toh, H., Oshima, K., Nakano, A., Omori, E., Hattori, Y., Arakawa, K., Suda, W., Honda, K. & Hattori, M., 2015 Sep 1, In: Journal of Biotechnology. 210, p. 81-82 2 p.

  Research output: Contribution to journal › Article › peer-review
  4 Citations (Scopus)

• Complete genome sequence of Bifidobacterium bifidum JCM 1255^T isolated from feces of a breast-fed infant

  Morita, H., Toh, H., Oshima, K., Nakano, A., Shindo, C., Komiya, K., Arakawa, K., Suda, W., Honda, K. & Hattori, M., 2015 Sep 1, In: Journal of Biotechnology. 210, p. 66-67 2 p.

  Research output: Contribution to journal › Article › peer-review
  3 Citations (Scopus)

• Complete genome sequence of Bifidobacterium angulatum JCM 7096^T isolated from human feces

  Morita, H., Toh, H., Oshima, K., Nakano, A., Kiuchi, M., Kuroyanagi, H., Arakawa, K., Suda, W., Honda, K. & Hattori, M., 2015 Oct 1, In: Journal of Biotechnology. 211, p. 10-11 2 p.

  Research output: Contribution to journal › Article › peer-review
  4 Citations (Scopus)

• Complete genome sequence of Bacillus cereus NC7401, which produces high levels of the emetic toxin cereulide

  Takeno, A., Okamoto, A., Tori, K., Oshima, K., Hirakawa, H., Toh, H., Agata, N., Yamada, K., Ogasawara, N., Hayashi, T., Shimizu, T., Kuhara, S., Hattori, M. & Ohta, M., 2012 Sep, In: Journal of Bacteriology. 194, 17, p. 4767-4768 2 p.

  Research output: Contribution to journal › Article › peer-review
  18 Citations (Scopus)

• Complete genome sequence of a phenanthrene degrader, Mycobacterium sp. strain EPa45 (NBRC 110737), isolated from a phenanthrene-degrading consortium

  Kato, H., Ogawa, N., Ohtsubo, Y., Oshima, K., Toyoda, A., Mori, H., Nagata, Y., Kurokawa, K., Hattori, M., Fujiyama, A. & Tsuda, M., 2015, In: Genome Announcements. 3, 4, e00782-15.

  Research output: Contribution to journal › Article › peer-review
  5 Citations (Scopus)

• Complete genome sequence and comparative analysis of the wild-type commensal escherichia coli strain se11 isolated from a healthy adult

  Oshima, K., Toh, H., Ogura, Y., Sasamoto, H., Morita, H., Park, S. H., Ooka, T., Iyoda, S., Taylor, T. D., Hayashi, T., Itoh, K. & Hattori, M., 2008 Dec, In: DNA Research. 15, 6, p. 375-386 12 p.

  Research output: Contribution to journal › Article › peer-review
  68 Citations (Scopus)

• Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis

  Ikeda, H., Ishikawa, J., Hanamoto, A., Shinose, M., Kikuchi, H., Shiba, T., Sakaki, Y., Hattori, M. & Omura, S., 2003 May 1, In: Nature Biotechnology. 21, 5, p. 526-531 6 p.

  Research output: Contribution to journal › Article › peer-review
  972 Citations (Scopus)

• Complete genome sequence and comparative analysis of the fish pathogen lactococcus garvieae

  Morita, H., Toh, H., Oshima, K., Yoshizaki, M., Kawanishi, M., Nakaya, K., Suzuki, T., Miyauchi, E., Ishii, Y., Tanabe, S., Murakami, M. & Hattori, M., 2011, In: PLoS One. 6, 8, e23184.

  Research output: Contribution to journal › Article › peer-review
  66 Citations (Scopus)

• Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell

  Hongoh, Y., Sharma, V. K., Prakash, T., Noda, S., Taylor, T. D., Kudo, T., Sakaki, Y., Toyoda, A., Hattori, M. & Ohkuma, M., 2008 Apr 8, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 14, p. 5555-5560 6 p.

  Research output: Contribution to journal › Article › peer-review
  170 Citations (Scopus)

• Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochordata)

  Yokobori, S. I., Ueda, T., Feldmaier-Fuchs, G., Pääbo, S., Ueshima, R., Kondow, A., Nishikawa, K. & Watanabe, K., 1999 Dec 1, In: Genetics. 153, 4, p. 1851-1862 12 p.

  Research output: Contribution to journal › Article › peer-review
  64 Citations (Scopus)

• Complete discrimination of docosahexaenoate from arachidonate by 85 kDa cytosolic phospholipase A₂ during the hydrolysis of diacyl- and alkenylacylglycerophosphoethanolamine

  Shikano, M., Masuzawa, Y., Yazawa, K., Takayama, K., Kudo, I. & Inoue, K., 1994 May 13, In: Biochimica et Biophysica Acta (BBA)/Lipids and Lipid Metabolism. 1212, 2, p. 211-216 6 p.

  Research output: Contribution to journal › Article › peer-review
  92 Citations (Scopus)

• Complete deoxygenation from a Hemoglobin solution by an electrochemical method and heat treatment for virus inactivation

  Ikebuchi, K., Sakai, H., Takeoka, S., Huang, Y., Tsuchida, E., Ikeda, H., Hirayama, J. & Abe, H., 2002, In: Biotechnology Progress. 18, 1, p. 101-107 7 p.

  Research output: Contribution to journal › Article › peer-review
  10 Citations (Scopus)