A gain scheduling model of temperature compensation for circadian rhythm of cyanobacteria

Miki Shimada, Kenko Uchida

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Abstract

    The KaiC phosphorylation cycle generates the cir-cadian rhythm without the transcription and translation of kai genes. To study the mechanism of the circadian rhythm, we use the model proposed by Kurosawa et al, describing the KaiC phosphorylation process in DD case. The temperature compensation is one of the most important features of the circadian rhythm. Therefore, some methods used to construct the temperature compensated model, have been proposed. In this paper, we applied the gain scheduling method proposed by Takeuchi to the model. In which, we focused on another essential feature named 'temperature entrainment'. This study investigates the mechanism of the phase shift and the temperature entrainment by using the temperature compensated model under the temperature cycle. Simulations results, including the comparison with the biological experiments, clearly illustrate the effectiveness of the proposed model.

    Original languageEnglish
    Title of host publication2013 9th Asian Control Conference, ASCC 2013
    DOIs
    Publication statusPublished - 2013
    Event2013 9th Asian Control Conference, ASCC 2013 - Istanbul
    Duration: 2013 Jun 232013 Jun 26

    Other

    Other2013 9th Asian Control Conference, ASCC 2013
    CityIstanbul
    Period13/6/2313/6/26

    Fingerprint

    Scheduling
    Phosphorylation
    Temperature
    Transcription
    Phase shift
    Compensation and Redress
    Cyanobacteria
    Genes
    Experiments

    Keywords

    • circadian rhythm
    • gain scheduling
    • temperature compensation
    • temperature entrainment

    ASJC Scopus subject areas

    • Control and Systems Engineering

    Cite this

    A gain scheduling model of temperature compensation for circadian rhythm of cyanobacteria. / Shimada, Miki; Uchida, Kenko.

    2013 9th Asian Control Conference, ASCC 2013. 2013. 6606018.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Shimada, M & Uchida, K 2013, A gain scheduling model of temperature compensation for circadian rhythm of cyanobacteria. in 2013 9th Asian Control Conference, ASCC 2013., 6606018, 2013 9th Asian Control Conference, ASCC 2013, Istanbul, 13/6/23. https://doi.org/10.1109/ASCC.2013.6606018
    Shimada, Miki ; Uchida, Kenko. / A gain scheduling model of temperature compensation for circadian rhythm of cyanobacteria. 2013 9th Asian Control Conference, ASCC 2013. 2013.
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