Active species for Ce(IV)-induced hydrolysis of phosphodiester linkage in cAMP and DNA

Jun Sumaoka, Kenichiro Furuki, Yuki Kojima, Masahiko Shibata, Kimihiko Hirao, Naoya Takeda, Makoto Komiyama

Research output: Contribution to journalArticle

10 Citations (Scopus)

Abstract

The hydrolysis of cyclic adenosine 3′,5′-monophosphate and 2′-deoxythymidylyl(3′-5′)2′-deoxythymidine by Ce(NH 4)2(NO3)6 was kinetically studied. The rate of hydrolysis was fairly proportional to the concentration of [Ce 2 IV (OH)4]4+, showing that this is the catalytically active species. According to quantum-chemical calculation, the two Ce(IV) ions in this [Ce2 IV (OH)4] 4+ cluster are bridged by two OH residues. Upon the complex formation with H2PO4 - (a model compound for the phosphodiesters), these two Ce(IV) ions bind the two oxygen atoms of the substrate and enhance the electrophilicity of the phosphorus atom. The catalytic mechanism of Ce(IV)-induced hydrolysis of phosphodiesters has been proposed on the basis these results.

Original languageEnglish
Pages (from-to)523-538
Number of pages16
JournalNucleosides, Nucleotides and Nucleic Acids
Volume25
Issue number4-6
DOIs
Publication statusPublished - 2006 Jun 1
Externally publishedYes

Fingerprint

Hydrolysis
DNA
Ions
Atoms
Adenosine
Thymidine
Phosphorus
Oxygen
Substrates
Cyclic AMP
5'-deoxythymidine

Keywords

  • Artificial nuclease
  • Cerium
  • DNA cleavage
  • Enzyme models
  • Phosphodiester hydrolysis

ASJC Scopus subject areas

  • Genetics
  • Biochemistry

Cite this

Active species for Ce(IV)-induced hydrolysis of phosphodiester linkage in cAMP and DNA. / Sumaoka, Jun; Furuki, Kenichiro; Kojima, Yuki; Shibata, Masahiko; Hirao, Kimihiko; Takeda, Naoya; Komiyama, Makoto.

In: Nucleosides, Nucleotides and Nucleic Acids, Vol. 25, No. 4-6, 01.06.2006, p. 523-538.

Research output: Contribution to journalArticle

Sumaoka, Jun ; Furuki, Kenichiro ; Kojima, Yuki ; Shibata, Masahiko ; Hirao, Kimihiko ; Takeda, Naoya ; Komiyama, Makoto. / Active species for Ce(IV)-induced hydrolysis of phosphodiester linkage in cAMP and DNA. In: Nucleosides, Nucleotides and Nucleic Acids. 2006 ; Vol. 25, No. 4-6. pp. 523-538.
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