Cryogenic coherent x-ray diffraction imaging for biological non-crystalline particles using the KOTOBUKI-1 diffraction apparatus at SACLA

Tomotaka Oroguchi, Yuki Sekiguchi, Amane Kobayashi, Yu Masaki, Asahi Fukuda, Saki Hashimoto, Masayoshi Nakasako, Yuichi Ichikawa, Hitoshi Kurumizaka, Mitsuhiro Shimizu, Yayoi Inui, Sachihiro Matsunaga, Takayuki Kato, Keiichi Namba, Keiichi Yamaguchi, Kazuo Kuwata, Hiroshi Kameda, Naoya Fukui, Yasushi Kawata, Takashi KameshimaYuki Takayama, Koji Yonekura, Masaki Yamamoto

    Research output: Contribution to journalArticle

    6 Citations (Scopus)

    Abstract

    We have developed an experimental apparatus named KOTOBUKI-1 for use in the coherent x-ray diffraction imaging experiments of frozen-hydrated non-crystalline particles at cryogenic temperature. The apparatus allows us to collect diffraction data for frozen-hydrated specimens at 66 K and provides an experimental environment to easily transfer frozen-hydrated specimens from liquid nitrogen storage to the specimen stage for x-ray exposure. Since 2012, the apparatus has been used in the single-shot diffraction data collection of non-crystalline biological cells and cellular components with dimensions from micrometer to submicrometer using x-ray free electron lasers at SACLA. Here we report on the performance of the KOTOBUKI-1 diffraction apparatus and some structure analyses of biological cells and cellular components. Based on the present results, we also discuss the future developments of diffraction apparatus for more efficient data collection.

    Original languageEnglish
    JournalJournal of Physics B: Atomic, Molecular and Optical Physics
    Volume48
    Issue number18
    DOIs
    Publication statusPublished - 2015 Jul 29

    Fingerprint

    cryogenics
    x ray diffraction
    diffraction
    x ray lasers
    cryogenic temperature
    free electron lasers
    liquid nitrogen
    shot
    micrometers
    x rays

    Keywords

    • Biological cell
    • Coherent x-ray diffraction imaging
    • X-ray free electron laser

    ASJC Scopus subject areas

    • Condensed Matter Physics
    • Atomic and Molecular Physics, and Optics

    Cite this

    Cryogenic coherent x-ray diffraction imaging for biological non-crystalline particles using the KOTOBUKI-1 diffraction apparatus at SACLA. / Oroguchi, Tomotaka; Sekiguchi, Yuki; Kobayashi, Amane; Masaki, Yu; Fukuda, Asahi; Hashimoto, Saki; Nakasako, Masayoshi; Ichikawa, Yuichi; Kurumizaka, Hitoshi; Shimizu, Mitsuhiro; Inui, Yayoi; Matsunaga, Sachihiro; Kato, Takayuki; Namba, Keiichi; Yamaguchi, Keiichi; Kuwata, Kazuo; Kameda, Hiroshi; Fukui, Naoya; Kawata, Yasushi; Kameshima, Takashi; Takayama, Yuki; Yonekura, Koji; Yamamoto, Masaki.

    In: Journal of Physics B: Atomic, Molecular and Optical Physics, Vol. 48, No. 18, 29.07.2015.

    Research output: Contribution to journalArticle

    Oroguchi, T, Sekiguchi, Y, Kobayashi, A, Masaki, Y, Fukuda, A, Hashimoto, S, Nakasako, M, Ichikawa, Y, Kurumizaka, H, Shimizu, M, Inui, Y, Matsunaga, S, Kato, T, Namba, K, Yamaguchi, K, Kuwata, K, Kameda, H, Fukui, N, Kawata, Y, Kameshima, T, Takayama, Y, Yonekura, K & Yamamoto, M 2015, 'Cryogenic coherent x-ray diffraction imaging for biological non-crystalline particles using the KOTOBUKI-1 diffraction apparatus at SACLA', Journal of Physics B: Atomic, Molecular and Optical Physics, vol. 48, no. 18. https://doi.org/10.1088/0953-4075/48/18/184003
    Oroguchi, Tomotaka ; Sekiguchi, Yuki ; Kobayashi, Amane ; Masaki, Yu ; Fukuda, Asahi ; Hashimoto, Saki ; Nakasako, Masayoshi ; Ichikawa, Yuichi ; Kurumizaka, Hitoshi ; Shimizu, Mitsuhiro ; Inui, Yayoi ; Matsunaga, Sachihiro ; Kato, Takayuki ; Namba, Keiichi ; Yamaguchi, Keiichi ; Kuwata, Kazuo ; Kameda, Hiroshi ; Fukui, Naoya ; Kawata, Yasushi ; Kameshima, Takashi ; Takayama, Yuki ; Yonekura, Koji ; Yamamoto, Masaki. / Cryogenic coherent x-ray diffraction imaging for biological non-crystalline particles using the KOTOBUKI-1 diffraction apparatus at SACLA. In: Journal of Physics B: Atomic, Molecular and Optical Physics. 2015 ; Vol. 48, No. 18.
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    AU - Namba, Keiichi

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    AU - Kuwata, Kazuo

    AU - Kameda, Hiroshi

    AU - Fukui, Naoya

    AU - Kawata, Yasushi

    AU - Kameshima, Takashi

    AU - Takayama, Yuki

    AU - Yonekura, Koji

    AU - Yamamoto, Masaki

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