POODLE-S: Web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix

Kana Shimizu, Shuichi Hirose, Tamotsu Noguchi

Research output: Contribution to journalArticle

85 Citations (Scopus)

Abstract

Summary: Protein disorder is characterized by a lack of a stable 3D structure, and is considered to be involved in a number of important protein functions such as regulatory and signalling events. We developed a web application, the POODLE-S, which predicts the disordered region from amino acid sequences by using physicochemical features and reduced amino acid set of a position-specific scoring matrix.

Original languageEnglish
Pages (from-to)2337-2338
Number of pages2
JournalBioinformatics
Volume23
Issue number17
DOIs
Publication statusPublished - 2007 Sep 1

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ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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