Real-time monitoring of cell-free translation on a quartz-crystal microbalance

Shuntaro Takahashi, Masaaki Iida, Hiroyuki Furusawa, Yoshihiro Shimizu, Takuya Ueda, Yoshio Okahata

Research output: Contribution to journalArticle

17 Citations (Scopus)

Abstract

The efficiency of protein synthesis is often regulated post- transcriptionally by sequences within the mRNA. To investigate the reactions of protein translation, we established a system that allowed real-time monitoring of protein synthesis using a cell-free translation mixture and a 27 MHz quartz-crystal microbalance (QCM). Using an mRNA that encoded a fusion polypeptide comprising the streptavidin-binding peptide (SBP) tag, a portion of Protein D as a spacer, and the SecM arrest sequence, we could follow the binding of the SBP tag, while it was displayed on the 70S ribosome, to a streptavidin-modified QCM over time. Thus, we could follow a single turnover of protein synthesis as a change in mass. This approach allowed us to evaluate the effects of different antibiotics and mRNA sequences on the different steps of translation. From the results of this study, we have determined that both the formation of the initiation complex from the 70S ribosome, mRNA, and fMet-tRNAfMet and the accommodation of the second aminoacyl-tRNA to the initiation complex are rate-limiting steps in protein synthesis.

Original languageEnglish
Pages (from-to)9326-9332
Number of pages7
JournalJournal of the American Chemical Society
Volume131
Issue number26
DOIs
Publication statusPublished - 2009 Jul 8
Externally publishedYes

Fingerprint

Quartz Crystal Microbalance Techniques
Quartz crystal microbalances
Proteins
Monitoring
Messenger RNA
Ribosomes
Peptides
Streptavidin
Computer Systems
Protein Biosynthesis
Transfer RNA
Polypeptides
Antibiotics
Anti-Bacterial Agents
Fusion reactions

ASJC Scopus subject areas

  • Chemistry(all)
  • Catalysis
  • Biochemistry
  • Colloid and Surface Chemistry

Cite this

Real-time monitoring of cell-free translation on a quartz-crystal microbalance. / Takahashi, Shuntaro; Iida, Masaaki; Furusawa, Hiroyuki; Shimizu, Yoshihiro; Ueda, Takuya; Okahata, Yoshio.

In: Journal of the American Chemical Society, Vol. 131, No. 26, 08.07.2009, p. 9326-9332.

Research output: Contribution to journalArticle

Takahashi, Shuntaro ; Iida, Masaaki ; Furusawa, Hiroyuki ; Shimizu, Yoshihiro ; Ueda, Takuya ; Okahata, Yoshio. / Real-time monitoring of cell-free translation on a quartz-crystal microbalance. In: Journal of the American Chemical Society. 2009 ; Vol. 131, No. 26. pp. 9326-9332.
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