Single nucleotide mismatch analysis using oligonucleotide probes synthesized on bacterial magnetic particle

Hiroyuki Ota, Atsushi Arakaki, Tsuyoshi Tanaka, Haruko Takeyama, Tadashi Matsunaga

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

An approach to analyze mismatches using short and specific oligonucleotide probes directly synthesized on bacterial magnetic particles (BMPs) by phosphoramidite methods was exploited. Approximately 126 molecules of 4-mer oligonucleotides/particle were synthesized on BMPs with high reaction efficiencies. Hybridization between FITC-labeled oligonucleotides and chemically synthesized oligonucleotides on BMPs was performed. Perfect matched and mismatched hybridizations were successfully discriminated by using the oligonucleotide probes on BMPs.

Original languageEnglish
Pages (from-to)305-309
Number of pages5
JournalBiomolecular Engineering
Volume20
Issue number4-6
DOIs
Publication statusPublished - 2003 Jul
Externally publishedYes

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Oligonucleotide Probes
Oligonucleotides
Nucleotides
Fluorescein-5-isothiocyanate
Molecules

Keywords

  • Bacterial magnetic particles
  • Hybridization
  • Mismatch discrimination
  • Oligonucleotide synthesis

ASJC Scopus subject areas

  • Molecular Biology

Cite this

Single nucleotide mismatch analysis using oligonucleotide probes synthesized on bacterial magnetic particle. / Ota, Hiroyuki; Arakaki, Atsushi; Tanaka, Tsuyoshi; Takeyama, Haruko; Matsunaga, Tadashi.

In: Biomolecular Engineering, Vol. 20, No. 4-6, 07.2003, p. 305-309.

Research output: Contribution to journalArticle

Ota, Hiroyuki ; Arakaki, Atsushi ; Tanaka, Tsuyoshi ; Takeyama, Haruko ; Matsunaga, Tadashi. / Single nucleotide mismatch analysis using oligonucleotide probes synthesized on bacterial magnetic particle. In: Biomolecular Engineering. 2003 ; Vol. 20, No. 4-6. pp. 305-309.
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