Tunability of the ratio of cell states after the synthetic diversification by the diversity generator

Ryoji Sekine, Masayuki Yamamura, Masami Hagiya, Daisuke Kiga

Research output: Contribution to journalArticle

Abstract

The autonomous generation of phenotypic diversity in embryonic cell populations can be explained by Waddington's landscape. The landscape proposes that intra- and inter-cellular interactions mediate the generation of cellular diversity. Recently, we implemented, in a population of Escherichia coli, a synthetic diversification, which is governed by inter-cellular signaling mediated by acyl-homoserine lactone (AHL). The cells with the diversity generator diversified into two distinct cell states, "high" and "low," if all of the cells started from the low state. The ratio of the states after the diversification was affected by the velocity of autonomous signal accumulation, which depends on the cell density and the AHL production rate of individual cells. The dependency of the ratio on the initial cell density is reminiscent of the community effect, which is observed in animal development and is important for ES-cell differentiation.Therefore, it is worthwhile reviewing the roles of natural animal gene networks with similar topologies to the diversity generator design. The diversity generator design will also be the basis for a tool to direct cell fates on the population level in tissue engineering. Here, we discuss the tunability of the ratio of cell states by our synthetic circuit design.

Original languageEnglish
Pages (from-to)393-394
Number of pages2
JournalCommunicative and Integrative Biology
Volume5
Issue number4
DOIs
Publication statusPublished - 2012
Externally publishedYes

Fingerprint

generators (equipment)
Acyl-Butyrolactones
cells
homoserine
lactones
Cell Count
Population
Gene Regulatory Networks
Tissue Engineering
tissue engineering
animal development
cell communication
Cell Differentiation
cell differentiation
topology
Escherichia coli

Keywords

  • Bifurcation
  • Bioengineering
  • Community effect
  • Inter-cellular signaling
  • Phenotypic diversification
  • Synthetic biology
  • Tissue engineering
  • Waddington epigenetic landscape

ASJC Scopus subject areas

  • Agricultural and Biological Sciences(all)

Cite this

Tunability of the ratio of cell states after the synthetic diversification by the diversity generator. / Sekine, Ryoji; Yamamura, Masayuki; Hagiya, Masami; Kiga, Daisuke.

In: Communicative and Integrative Biology, Vol. 5, No. 4, 2012, p. 393-394.

Research output: Contribution to journalArticle

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