TY - JOUR
T1 - Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
AU - Sekine, Ryoji
AU - Yamamura, Masayuki
AU - Hagiya, Masami
AU - Kiga, Daisuke
N1 - Funding Information:
This work was supported by the Precursory Research for Embryonic Science and Technology program of Japan Science and Technology to D.K. and the Grant-in-Aid for Scientific Research (KAKENHI) programs from Ministry of Education, Culture, Sports, Science, and Technology (#14085101 to M.H.; #14085203 to M.Y. and D.K.; #23119005 to D.K.; and #23119008 to M.Y.) and Japan Society for the Promotion of Science (#21650018 to M.H. and D.K.; and #23680031 to D.K.). We thank Masahiro Takinoue and other members of the group for helpful discussions.
PY - 2012
Y1 - 2012
N2 - The autonomous generation of phenotypic diversity in embryonic cell populations can be explained by Waddington's landscape. The landscape proposes that intra- and inter-cellular interactions mediate the generation of cellular diversity. Recently, we implemented, in a population of Escherichia coli, a synthetic diversification, which is governed by inter-cellular signaling mediated by acyl-homoserine lactone (AHL). The cells with the diversity generator diversified into two distinct cell states, "high" and "low," if all of the cells started from the low state. The ratio of the states after the diversification was affected by the velocity of autonomous signal accumulation, which depends on the cell density and the AHL production rate of individual cells. The dependency of the ratio on the initial cell density is reminiscent of the community effect, which is observed in animal development and is important for ES-cell differentiation.Therefore, it is worthwhile reviewing the roles of natural animal gene networks with similar topologies to the diversity generator design. The diversity generator design will also be the basis for a tool to direct cell fates on the population level in tissue engineering. Here, we discuss the tunability of the ratio of cell states by our synthetic circuit design.
AB - The autonomous generation of phenotypic diversity in embryonic cell populations can be explained by Waddington's landscape. The landscape proposes that intra- and inter-cellular interactions mediate the generation of cellular diversity. Recently, we implemented, in a population of Escherichia coli, a synthetic diversification, which is governed by inter-cellular signaling mediated by acyl-homoserine lactone (AHL). The cells with the diversity generator diversified into two distinct cell states, "high" and "low," if all of the cells started from the low state. The ratio of the states after the diversification was affected by the velocity of autonomous signal accumulation, which depends on the cell density and the AHL production rate of individual cells. The dependency of the ratio on the initial cell density is reminiscent of the community effect, which is observed in animal development and is important for ES-cell differentiation.Therefore, it is worthwhile reviewing the roles of natural animal gene networks with similar topologies to the diversity generator design. The diversity generator design will also be the basis for a tool to direct cell fates on the population level in tissue engineering. Here, we discuss the tunability of the ratio of cell states by our synthetic circuit design.
KW - Bifurcation
KW - Bioengineering
KW - Community effect
KW - Inter-cellular signaling
KW - Phenotypic diversification
KW - Synthetic biology
KW - Tissue engineering
KW - Waddington epigenetic landscape
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U2 - 10.4161/cib.20310
DO - 10.4161/cib.20310
M3 - Article
AN - SCOPUS:84901331383
SN - 1942-0889
VL - 5
SP - 393
EP - 394
JO - Communicative and Integrative Biology
JF - Communicative and Integrative Biology
IS - 4
ER -