由良 敬

教授(任期付)

  • 1785 引用
  • 18 h指数
1993 …2020

年単位の研究成果

Pureに変更を加えた場合、すぐここに表示されます。

研究成果

フィルター
Article
2020

Diversification of CpG-Island Promoters Revealed by Comparative Analysis Between Human and Rhesus Monkey Genomes

Aoto, S., Fushimi, M., Yura, K. & Okamura, K., 2020 8 1, : : Mammalian Genome. 31, 7-8, p. 240-251 12 p.

研究成果: Article

公開

Knowledge and attitude of hereditary breast cancer among Japanese university female students

Terui-Kohbata, H., Egawa, M., Yura, K. & Yoshida, M., 2020 7 1, : : Journal of Human Genetics. 65, 7, p. 591-599 9 p.

研究成果: Article

Metagenome sequences from the environment of diseased otter clams, Lutraria rhynchaena, from a farm in Vietnam

Kagaya, Y., Minei, R., Duong, H. T. T., Le, B. T. N., Dang, L. T., Tran, T. T. H., Nguyen, H. T., Kinoshita, K., Yura, K., Ogura, A. & Kim, O. T. P., 2020, : : Microbiology Resource Announcements. 9, 2, e01068-19.

研究成果: Article

公開
2019

A prospective compound screening contest identified broader inhibitors for Sirtuin 1

Chiba, S., Ohue, M., Gryniukova, A., Borysko, P., Zozulya, S., Yasuo, N., Yoshino, R., Ikeda, K., Shin, W. H., Kihara, D., Iwadate, M., Umeyama, H., Ichikawa, T., Teramoto, R., Hsin, K. Y., Gupta, V., Kitano, H., Sakamoto, M., Higuchi, A., Miura, N. および33人, Yura, K., Mochizuki, M., Ramakrishnan, C., Thangakani, A. M., Velmurugan, D., Gromiha, M. M., Nakane, I., Uchida, N., Hakariya, H., Tan, M., Nakamura, H. K., Suzuki, S. D., Ito, T., Kawatani, M., Kudoh, K., Takashina, S., Yamamoto, K. Z., Moriwaki, Y., Oda, K., Kobayashi, D., Okuno, T., Minami, S., Chikenji, G., Prathipati, P., Nagao, C., Mohsen, A., Ito, M., Mizuguchi, K., Honma, T., Ishida, T., Hirokawa, T., Akiyama, Y. & Sekijima, M., 2019 12 1, : : Scientific reports. 9, 1, 19585.

研究成果: Article

公開

Engineered Functional Recovery of Microbial Rhodopsin without Retinal-Binding Lysine

Yamauchi, Y., Konno, M., Yamada, D., Yura, K., Inoue, K., Béjà, O. & Kandori, H., 2019 1 1, : : Photochemistry and Photobiology.

研究成果: Article

公開
2018

Starfish Apaf-1 activates effector caspase-3/9 upon apoptosis of aged eggs

Tamura, R., Takada, M., Sakaue, M., Yoshida, A., Ohi, S., Hirano, K., Hayakawa, T., Hirohashi, N., Yura, K. & Chiba, K., 2018 12 1, : : Scientific reports. 8, 1, 1611.

研究成果: Article

8 引用 (Scopus)

Synaptic transmission from subplate neurons controls radial migration of neocortical neurons

Ohtaka-Maruyama, C., Okamoto, M., Endo, K., Oshima, M., Kaneko, N., Yura, K., Okado, H., Miyata, T. & Maeda, N., 2018 4 20, : : Science. 360, 6386, p. 313-317 5 p.

研究成果: Article

27 引用 (Scopus)
2017

REFOLDdb: A new and sustainable gateway to experimental protocols for protein refolding

Mizutani, H., Sugawara, H., Buckle, A. M., Sangawa, T., Miyazono, K. I., Ohtsuka, J., Nagata, K., Shojima, T., Nosaki, S., Xu, Y., Wang, D., Hu, X., Tanokura, M. & Yura, K., 2017 4 24, : : BMC Structural Biology. 17, 1, 4.

研究成果: Article

2 引用 (Scopus)
2016

Complete genome sequence of the mitochondrial DNA of the sparkling enope squid, Watasenia scintillans

Hayashi, K., Kawai, Y. L., Yura, K., Yoshida, M. A., Ogura, A., Hata, K., Nakabayashi, K. & Okamura, K., 2016 5 1, : : Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis. 27, 3, p. 1842-1843 2 p.

研究成果: Article

2 引用 (Scopus)

VaProS: a database-integration approach for protein/genome information retrieval

Gojobori, T., Ikeo, K., Katayama, Y., Kawabata, T., Kinjo, A. R., Kinoshita, K., Kwon, Y., Migita, O., Mizutani, H., Muraoka, M., Nagata, K., Omori, S., Sugawara, H., Yamada, D. & Yura, K., 2016 12 1, : : Journal of structural and functional genomics. 17, 4, p. 69-81 13 p.

研究成果: Article

5 引用 (Scopus)
2015

Biochemical analysis of phytolacca DOPA dioxygenase

Takahashi, K., Yoshida, K., Yura, K., Ashihara, H. & Sakuta, M., 2015 1 1, : : Natural Product Communications. 10, 5, p. 717-719 3 p.

研究成果: Article

公開
1 引用 (Scopus)

Complete genome sequence of the mitochondrial DNA of the river lamprey, Lethenteron japonicum

Kawai, Y. L., Yura, K., Shindo, M., Kusakabe, R., Hayashi, K., Hata, K., Nakabayashi, K. & Okamura, K., 2015 11 2, : : Mitochondrial DNA. 26, 6, p. 863-864 2 p.

研究成果: Article

2 引用 (Scopus)

Design and synthesis of 4-benzyl-1-(2H)-phthalazinone derivatives as novel androgen receptor antagonists

Inoue, K., Urushibara, K., Kanai, M., Yura, K., Fujii, S., Ishigami-Yuasa, M., Hashimoto, Y., Mori, S., Kawachi, E., Matsumura, M., Hirano, T., Kagechika, H. & Tanatani, A., 2015 9 18, : : European Journal of Medicinal Chemistry. 102, p. 310-319 10 p., 8038.

研究成果: Article

14 引用 (Scopus)

Distinct evolutionary rate in the eye field transcription factors found by estimation of ancestral protein structure

Kamijyo, A., Yura, K. & Ogura, A., 2015 1 25, : : Gene. 555, 2, p. 73-79 7 p.

研究成果: Article

3 引用 (Scopus)
9 引用 (Scopus)
3 引用 (Scopus)
2014

Cephalopod eye evolution was modulated by the acquisition of Pax-6 splicing variants

Yoshida, M. A., Yura, K. & Ogura, A., 2014 3 5, : : Scientific reports. 4, 4256.

研究成果: Article

16 引用 (Scopus)

Conformational behavior of flavin adenine dinucleotide: Conserved stereochemistry in bound and free states

Kuppuraj, G., Kruise, D. & Yura, K., 2014 11 26, : : Journal of Physical Chemistry B. 118, 47, p. 13486-13497 12 p.

研究成果: Article

10 引用 (Scopus)

Structural insights of post-translational modification sites in the proteome of Thermus thermophilus

Masui, R., Takahata, Y., Inoue, M., Iio, Y., Okanishi, H., Kim, K., Nakagawa, N., Yura, K. & Kuramitsu, S., 2014 9 1, : : Journal of Structural and Functional Genomics. 15, 3, p. 137-151 15 p.

研究成果: Article

3 引用 (Scopus)

Structure of the Microtubule-Binding Domain of Flagellar Dynein

Kato, Y. S., Yagi, T., Harris, S. A., Ohki, S. Y., Yura, K., Shimizu, Y., Honda, S., Kamiya, R., Burgess, S. A. & Tanokura, M., 2014 11 4, : : Structure. 22, 11, p. 1628-1638 11 p.

研究成果: Article

12 引用 (Scopus)
2013

A bicyclic 1-deoxygalactonojirimycin derivative as a novel pharmacological chaperone for GM1 gangliosidosis

Takai, T., Higaki, K., Aguilar-Moncayo, M., Mena-Barragán, T., Hirano, Y., Yura, K., Yu, L., Ninomiya, H., García-Moreno, M. I., Sakakibara, Y., Ohno, K., Nanba, E., Ortiz Mellet, C., García Fernández, J. M. & Suzuki, Y., 2013 3, : : Molecular Therapy. 21, 3, p. 526-532 7 p.

研究成果: Article

51 引用 (Scopus)
9 引用 (Scopus)

Distinct conformation of ATP molecule in solution and on protein

Kobayashi, E., Yura, K. & Nagai, Y., 2013, : : Biophysics (Japan). 9, p. 1-12 12 p.

研究成果: Article

7 引用 (Scopus)

Human origin recognition complex binds preferentially to G-quadruplex-preferable RNA and single-stranded DNA

Hoshina, S., Yura, K., Teranishi, H., Kiyasu, N., Tominaga, A., Kadoma, H., Nakatsuka, A., Kunichika, T., Obuse, C. & Waga, S., 2013 10 18, : : Journal of Biological Chemistry. 288, 42, p. 30161-30171 11 p.

研究成果: Article

55 引用 (Scopus)

Molecular and clinical characteristics of MSH6 germline variants detected in colorectal cancer patients

Terui, H., Tachikawa, T., Kakuta, M., Nishimura, Y., Yatsuoka, T., Yamaguchi, K., Yura, K. & Akagi, K., 2013 12, : : Oncology Reports. 30, 6, p. 2909-2916 8 p.

研究成果: Article

11 引用 (Scopus)
2012

Tuning glycosidase inhibition through aglycone interactions: Pharmacological chaperones for Fabry disease and GM1 gangliosidosis

Aguilar-Moncayo, M., Takai, T., Higaki, K., Mena-Barragán, T., Hirano, Y., Yura, K., Li, L., Yu, Y., Ninomiya, H., García-Moreno, M. I., Ishii, S., Sakakibara, Y., Ohno, K., Nanba, E., Ortiz Mellet, C., García Fernández, J. M. & Suzuki, Y., 2012 6 6, : : Chemical Communications. 48, 52, p. 6514-6516 3 p.

研究成果: Article

43 引用 (Scopus)
2011
17 引用 (Scopus)
2009

RESOPS: A database for analyzing the correspondence of rna editing sites to protein three-dimensional structures

Yura, K., Sulaiman, S., Hatta, Y., Shionyu, M. & Go, M., 2009 11, : : Plant and Cell Physiology. 50, 11, p. 1865-1873 9 p.

研究成果: Article

17 引用 (Scopus)

The interwinding nature of protein protein interfaces and its implication for protein complex formation

Yura, K. & Hayward, S., 2009 9 29, : : Bioinformatics. 25, 23, p. 3108-3113 6 p., btp563.

研究成果: Article

13 引用 (Scopus)
2008

Characteristics and prediction of rna editing sites in transcripts of the moss takakia lepidozioides chloroplast

Yura, K., Miyata, Y., Arikawa, T., Higuchi, M. & Sugita, M., 2008, : : DNA Research. 15, 5, p. 309-321 13 p.

研究成果: Article

9 引用 (Scopus)

ColiSNP database server mapping nsSNPs on protein structures

Kono, H., Yuasa, T., Nishiue, S. & Yura, K., 2008 1 1, : : Nucleic acids research. 36, SUPPL. 1, p. D409-D413

研究成果: Article

17 引用 (Scopus)
22 引用 (Scopus)

Discrimination of class i cyclobutane pyrimidine dimer photolyase from blue light photoreceptors by single methionine residue

Miyazawa, Y., Nishioka, H., Yura, K. & Yamato, T., 2008 3 15, : : Biophysical Journal. 94, 6, p. 2194-2203 10 p.

研究成果: Article

17 引用 (Scopus)

Key interactions in integrin ectodomain responsible for global conformational change detected by elastic network normal-mode analysis

Matsumoto, A., Kamata, T., Takagi, J., Iwasaki, K. & Yura, K., 2008 9 15, : : Biophysical Journal. 95, 6, p. 2895-2908 14 p.

研究成果: Article

15 引用 (Scopus)

The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts

Genome Information Integration Project and H-Invitational 2 Consortium, 2008 1, : : Nucleic acids research. 36, SUPPL. 1, p. D793-D799

研究成果: Article

55 引用 (Scopus)
2007
5 引用 (Scopus)
2006

Alternative splicing in human transcriptome: Functional and structural influence on proteins

Yura, K., Shionyu, M., Hagino, K., Hijikata, A., Hirashima, Y., Nakahara, T., Eguchi, T., Shinoda, K., Yamaguchi, A., Takahashi, K. I., Itoh, T., Imanishi, T., Gojobori, T. & Go, M., 2006 10 1, : : Gene. 380, 2, p. 63-71 9 p.

研究成果: Article

47 引用 (Scopus)
87 引用 (Scopus)
14 引用 (Scopus)

Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56 419 completely sequenced and manually annotated full-length cDNAs

Takeda, J. I., Suzuki, Y., Nakao, M., Barrero, R. A., Koyanagi, K. O., Jin, L., Motono, C., Hata, H., Isogai, T., Nagai, K., Otsuki, T., Kuryshev, V., Shionyu, M., Yura, K., Go, M., Thierry-Mieg, J., Thierry-Mieg, D., Wiemann, S., Nomura, N., Sugano, S. および2人, Gojobori, T. & Iman ishi, T., 2006 9 21, : : Nucleic acids research. 34, 14, p. 3917-3928 12 p.

研究成果: Article

32 引用 (Scopus)
2005
26 引用 (Scopus)
2004

Het-PDB Navi. A Database for Protein-Small Molecule Interactions

Yamaguchi, A., Iida, K., Matsui, N., Tomoda, S., Yura, K. & Go, M., 2004 1 1, : : Journal of biochemistry. 135, 1, p. 79-84 6 p.

研究成果: Article

34 引用 (Scopus)

Highly divergent actins from Karyorelictean, Heterotrich, and Litostome Ciliates

Kim, O. T. P., Yura, K., Nobuhiro, G. O. & Harumoto, T., 2004 3 1, : : Journal of Eukaryotic Microbiology. 51, 2, p. 227-233 7 p.

研究成果: Article

12 引用 (Scopus)

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

Imanishi, T., Itoh, T., Suzuki, Y., O'Donovan, C., Fukuchi, S., Koyanagi, K. O., Barrero, R. A., Tamura, T., Yamaguchi-Kabata, Y., Tanino, M., Yura, K., Miyazaki, S., Ikeo, K., Homma, K., Kasprzyk, A., Nishikawa, T., Hirakawa, M., Thierry-Mieg, J., Thierry-Mieg, D., Ashurst, J. および138人, Jia, L., Nakao, M., Thomas, M. A., Mulder, N., Karavidopoulou, Y., Jin, L., Kim, S., Yasuda, T., Lenhard, B., Eveno, E., Suzuki, Y., Yamasaki, C., Takeda, J. I., Gough, C., Hilton, P., Fujii, Y., Sakai, H., Tanaka, S., Amid, C., Bellgard, M., de Fatima Bonaldo, M., Bono, H., Bromberg, S. K., Brookes, A. J., Bruford, E., Carninci, P., Chelala, C., Couillault, C., de Souza, S. J., Debily, M. A., Devignes, M. D., Dubchak, I., Endo, T., Estreicher, A., Eyras, E., Fukami-Kobayashi, K., Gopinath, G. R., Graudens, E., Hahn, Y., Han, M., Han, Z. G., Hanada, K., Hanaoka, H., Harada, E., Hashimoto, K., Hinz, U., Hirai, M., Hishiki, T., Hopkinson, I., Imbeaud, S., Inoko, H., Kanapin, A., Kaneko, Y., Kasukawa, T., Kelso, J., Kersey, P., Kikuno, R., Kimura, K., Korn, B., Kuryshev, V., Makalowska, I., Makino, T., Mano, S., Mariage-Samson, R., Mashima, J., Matsuda, H., Mewes, H. W., Minoshima, S., Nagai, K., Nagasaki, H., Nagata, N., Nigam, R., Ogasawara, O., Ohara, O., Ohtsubo, M., Okada, N., Okido, T., Oota, S., Ota, M., Ota, T., Otsuki, T., Piatier-Tonneau, D., Poustka, A., Ren, S. X., Saitou, N., Sakai, K., Sakamoto, S., Sakate, R., Schupp, I., Servant, F., Sherry, S., Shiba, R., Shimizu, N., Shimoyama, M., Simpson, A. J., Soares, B., Steward, C., Suwa, M., Suzuki, M., Takahashi, A., Tamiya, G., Tanaka, H., Taylor, T., Terwilliger, J. D., Unneberg, P., Veeramachaneni, V., Watanabe, S., Wilming, L., Yasuda, N., Hyang-Yoo, S., Stodolsky, M., Makalowski, W., Go, M., Nakai, K., Takagi, T., Kanehisa, M., Sakaki, Y., Quackenbush, J., Okazaki, Y., Hayashizaki, Y., Hide, W., Chakraborty, R., Nishikawa, K., Sugawara, H., Tateno, Y., Chen, Z., Oishi, M., Tonellato, P., Apweiler, R., Okubo, K., Wagner, L., Wiemann, S., Strausberg, R. L., Isogai, T., Auffray, C., Nomura, N., Gojobori, T. & Sugano, S., 2004, : : PLoS Biology. 2, 6

研究成果: Article

262 引用 (Scopus)

Structure and function of a family 10 β-xylanase chimera of Streptomyces olivaceoviridis E-86 FXYN and Cellulomonas fimi cex

Kaneko, S., Ichinose, H., Fujimoto, Z., Kuno, A., Yura, K., Go, M., Mizuno, H., Kusakabe, I. & Kobayashi, H., 2004 6 18, : : Journal of Biological Chemistry. 279, 25, p. 26619-26626 8 p.

研究成果: Article

17 引用 (Scopus)
2003

Novel types of two-domain multi-copper oxidases: Possible missing links in the evolution

Nakamura, K., Kawabata, T., Yura, K. & Go, N., 2003 10 23, : : FEBS Letters. 553, 3, p. 239-244 6 p.

研究成果: Article

47 引用 (Scopus)
2001

Capacity of thermomonospora alba Xy1A to impart thermostability in family F/10 chimeric xylanases

Ahsan, M. M., Kaneko, S., Wang, Q., Yura, K., Go, M. & Hayash, K., 2001 1 2, : : Enzyme and Microbial Technology. 28, 1, p. 8-15 8 p.

研究成果: Article

14 引用 (Scopus)