Multilevel modeling of physiological systems and simulation platform: Physiodesigner, flint and flint K3 service

Yoshiyuki Asai*, Takeshi Abe, Masao Okita, Tomohiro Okuyama, Nobukazu Yoshioka, Shigetsohi Yokoyama, Masaru Nagaku, Ken Ichi Hagihara, Hiroaki Kitano

*この研究の対応する著者

研究成果: Conference contribution

13 被引用数 (Scopus)

抄録

Software framework to support modeling and performing simulations of multilevel physiological systems has been developed and expanded to support the cloud computing. The framework is composed of two blocks, i.e. PhysioDesigner and Flint. PhysioDesigner is an application providing a graphical user interface for assisting users in multilevel modeling of physiological functions and a terminal interface for script-based model building. Models built on PhysioDesigner are written in PHML (the physiological hierarchy markup language). Flint is a standalone simulator, supporting MPI for parallel computing on a proper system environment. Based on the standalone application, Flint K3 system supporting cloud computing has been developed, which provides a solution for portable high performance simulation. At the website of Flint K3, users can upload models described in PHML. In addition, PhysioDesigner and other applications can submit simulation jobs to Flint K3 directly at online.

本文言語English
ホスト出版物のタイトルProceedings - 2012 IEEE/IPSJ 12th International Symposium on Applications and the Internet, SAINT 2012
ページ215-219
ページ数5
DOI
出版ステータスPublished - 2012
外部発表はい
イベント2012 IEEE/IPSJ 12th International Symposium on Applications and the Internet, SAINT 2012 - Izmir, Turkey
継続期間: 2012 7月 162012 7月 20

出版物シリーズ

名前Proceedings - 2012 IEEE/IPSJ 12th International Symposium on Applications and the Internet, SAINT 2012

Conference

Conference2012 IEEE/IPSJ 12th International Symposium on Applications and the Internet, SAINT 2012
国/地域Turkey
CityIzmir
Period12/7/1612/7/20

ASJC Scopus subject areas

  • コンピュータ ネットワークおよび通信

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