Unconventional decoding of the AUA codon as methionine by mitochondrial tRNAMet with the anticodon f5CAU as revealed with a mitochondrial in vitro translation system

Chie Takemoto*, Linda L. Spremulli, Lisa A. Benkowski, Takuya Ueda, Takashi Yokogawa, Kimitsuna Watanabe


研究成果: Article査読

66 被引用数 (Scopus)


Mitochondrial (mt) tRNAMet has the unusual modified nucleotide 5-formylcytidine (f5C) in the first position of the anticodon. This tRNA must translate both AUG and AUA as methionine. By constructing an in vitro translation system from bovine liver mitochondria, we examined the decoding properties of the native mt tRNAMet carrying f5C in the anticodon compared to a transcript that lacks the modification. The native mt Met-tRNA could recognize both AUA and AUG codons as Met, but the corresponding synthetic tRNAMet lacking f5C (anticodon CAU), recognized only the AUG codon in both the codon-dependent ribosomal binding and in vitro translation assays. Furthermore, the Escherichia coli elongator tRNAMetm with the anticodon ac4CAU (ac4C-4-acetylcytidine) and the bovine cytoplasmic initiator tRNAMet (anticodon CAU) translated only the AUG codon for Met on mt ribosome. The codon recognition patterns of these tRNAs were the same on E. coli ribosomes. These results demonstrate that the f5C modification in mt tRNAMet plays a crucial role in decoding the nonuniversal AUA codon as Met, and that the genetic code variation is compensated by a change in the tRNA anticodon, not by a change in the ribosome. Base pairing models of f5C-G and f5C-A based on the chemical properties of f5C are presented.

ジャーナルNucleic acids research
出版ステータスPublished - 2009

ASJC Scopus subject areas

  • 遺伝学


「Unconventional decoding of the AUA codon as methionine by mitochondrial tRNA<sup>Met</sup> with the anticodon f<sup>5</sup>CAU as revealed with a mitochondrial in vitro translation system」の研究トピックを掘り下げます。これらがまとまってユニークなフィンガープリントを構成します。